Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0095
         (319 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14)               27   3.3  
SB_9039| Best HMM Match : M (HMM E-Value=0.00046)                      26   5.8  

>SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14)
          Length = 910

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 151 PLSLKKKKFSTNKHLLFYRKG 89
           PL + KK+FST+ +LL Y  G
Sbjct: 191 PLHISKKRFSTHINLLLYSHG 211


>SB_9039| Best HMM Match : M (HMM E-Value=0.00046)
          Length = 716

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 153 VHCH*KRKSLVQINIYCFIEKVLTINWVYIVNHYID 46
           V  H +   +V I +YC I   + I W  IV  Y++
Sbjct: 375 VDIHLEWTFIVDIYLYCVINVDIHIEWAIIVGIYLE 410


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,375,686
Number of Sequences: 59808
Number of extensions: 110392
Number of successful extensions: 172
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)