Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0095
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    26   6.8  
AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine re...    26   6.8  

>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = -1

Query: 154 GPL-SLKKKKF--STNKHLLFYRKGFNNKLGIH 65
           GPL +LK  KF  +T + + F+RK  N+K  IH
Sbjct: 283 GPLGTLKSTKFVLATVEPIQFFRKSINSKSKIH 315


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = -1

Query: 154 GPL-SLKKKKF--STNKHLLFYRKGFNNKLGIH 65
           GPL +LK  KF  +T + + F+RK  N+K  IH
Sbjct: 242 GPLGTLKSTKFVLATVEPIQFFRKSINSKSKIH 274


>AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein192 protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 123 VQINIYCFIEKVLTINWVYIVNHY 52
           V I + CFI  ++ I + Y++N+Y
Sbjct: 251 VSIPMICFIFTLIYIGFAYLINYY 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,710,173
Number of Sequences: 27780
Number of extensions: 90559
Number of successful extensions: 145
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)