Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0094
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1JL41 Cluster: Putative DNA-binding protein; n=1; Yers...    34   4.5  
UniRef50_A2PUE1 Cluster: EpsJ; n=1; Vibrio cholerae MZO-3|Rep: E...    33   7.9  
UniRef50_O23028 Cluster: T1G11.18 protein; n=7; Magnoliophyta|Re...    33   7.9  

>UniRef50_A1JL41 Cluster: Putative DNA-binding protein; n=1;
           Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
           Putative DNA-binding protein - Yersinia enterocolitica
           serotype O:8 / biotype 1B (strain 8081)
          Length = 668

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +2

Query: 419 FVFSLNNVVKSFLYHMTYFHLCLLLIWVGELQDPSGV-KWLPEPIEIKTA 565
           ++ SL N+ +     ++YFH+C LL ++G+  +  G+ K L + IE++ A
Sbjct: 533 YLLSLLNINEECDDELSYFHICSLLYYIGDNVEYKGIMKILTDTIELRMA 582


>UniRef50_A2PUE1 Cluster: EpsJ; n=1; Vibrio cholerae MZO-3|Rep: EpsJ
           - Vibrio cholerae MZO-3
          Length = 353

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 416 FFVFSLNNVVKSFLYHMTYFHLCLLLIWVGELQDPSGVKW--LPEPI 550
           FF  S+ N + + ++      LCL   W   L+D +G KW  LP P+
Sbjct: 112 FFSNSIKNYIVNKIFKQYDLRLCLGNYWKNNLEDITGQKWNVLPNPV 158


>UniRef50_O23028 Cluster: T1G11.18 protein; n=7; Magnoliophyta|Rep:
           T1G11.18 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 431

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 265 LNIIYDKYFKTLSKHKINKMWYLKLPRSM*RNNLMQKTLIIGTSVSAQTYFFCF 426
           L ++YD+Y KTL    +  +  L    S+  + ++ K + +G  +S + Y  CF
Sbjct: 243 LTVVYDRYLKTLPMRPLIHIIQLLYGLSILLDYILVKQINLGFGISNEVYVLCF 296


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,791,137
Number of Sequences: 1657284
Number of extensions: 11653926
Number of successful extensions: 21151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21150
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)