Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0094
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704...    30   2.4  

>04_04_0815 -
           28269918-28270022,28270164-28270226,28270342-28270460,
           28270586-28270684,28270761-28270953,28271024-28271117,
           28271339-28271394,28272372-28272431,28272877-28272989,
           28273286-28273343,28273429-28273521,28273659-28273904,
           28274990-28275371,28275523-28275595,28275692-28275795,
           28275872-28275963,28275996-28276106,28276225-28276309,
           28276385-28276518,28278264-28278302
          Length = 772

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +3

Query: 660 LLEIRWINTCGLTRRPTISNYANHNYFFRD*FLL 761
           ++ +RW+N+ G   R  ++ +++H Y F+  FL+
Sbjct: 312 IVSLRWVNSDGKAGRLYVNGFSDHAYLFQIAFLM 345


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,095,570
Number of Sequences: 37544
Number of extensions: 292483
Number of successful extensions: 446
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)