Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0093
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   1.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.6  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.5  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    22   4.6  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    22   4.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.0  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 HFNCNYKIYYNHKY 325
           H N NYK  YN+KY
Sbjct: 91  HNNNNYKYNYNNKY 104


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 525 RSLNCGFLNEQYEYTNQYKIHLTTCQIKSITLEGEILTDKIIILLNI 665
           R  N   +  +  Y +QY   +  C+IK+  ++ E L ++ I  ++I
Sbjct: 445 RCSNLNHMMREEFYQSQYGDPINNCEIKAGEIDAERLNNQGIESIDI 491


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 263 YFFGHLDHFNCNYKIYYNHKYTDTEY*YFILKYIYSLYTI 382
           Y + + +++N NY   YN+ Y +  Y      YI ++  I
Sbjct: 89  YKYSNYNNYNNNYNNNYNNNY-NNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 263 YFFGHLDHFNCNYKIYYNHKYTDTEY*YFILKYIYSLYTI 382
           Y + + +++N NY   YN+ Y +  Y      YI ++  I
Sbjct: 89  YKYSNYNNYNNNYNNNYNNNY-NNNYKKLYKNYIINIEQI 127


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = -3

Query: 164 LSAKTGVSINSNFNHLHIYYSNSIILTKMHSSHCA*QMLCKYLITVI 24
           +SAKT +S+    N   +   NS++ + +  ++ +  +L + L+ ++
Sbjct: 22  VSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNIL 68


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = -3

Query: 164 LSAKTGVSINSNFNHLHIYYSNSIILTKMHSSHCA*QMLCKYLITVI 24
           +SAKT +S+    N   +   NS++ + +  ++ +  +L + L+ ++
Sbjct: 22  VSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNIL 68


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 290 NCNYKIYYNHKYTDTEY 340
           N NY   Y  +Y D EY
Sbjct: 203 NTNYSSKYMREYNDPEY 219


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 561 EYTNQYKIHLTTCQIKSITLEGEILTDKIIILLNI 665
           +Y NQ   H T+ Q     L G +  +  ++LL++
Sbjct: 114 QYKNQNNNHYTSHQHLRTHLRGTLTVNVSVLLLSL 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,578
Number of Sequences: 438
Number of extensions: 3445
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)