Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0088
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 325 CFKYLISLLE**KFSKNFIHSSNPANIVNSPWNGFVRKNK 206
           CF +L+ ++    FS+    ++  A  V+  WN +  KN+
Sbjct: 327 CFYWLLVMVA--MFSRTQQSANKTATFVHEIWNKYALKNE 364


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 325 CFKYLISLLE**KFSKNFIHSSNPANIVNSPWNGFVRKNK 206
           CF +L+ ++    FS+    ++  A  V+  WN +  KN+
Sbjct: 283 CFYWLLVMVA--MFSRTQQSANKTATFVHEIWNKYALKNE 320


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 405 IEEGSVVFPRVPLLRVEG 458
           I +GS++  R P LRV G
Sbjct: 284 ITDGSIIGVRAPYLRVGG 301


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 405 IEEGSVVFPRVPLLRVEG 458
           I +GS++  R P LRV G
Sbjct: 291 ITDGSIIGVRAPYLRVGG 308


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 419 RSFFNSTYNNV 387
           +SFF  TYNN+
Sbjct: 26  KSFFGRTYNNI 36


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 447  STMAPSETPQI 415
            STMAPS TP +
Sbjct: 2290 STMAPSTTPMV 2300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,999
Number of Sequences: 336
Number of extensions: 4261
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)