Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0088
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-33|AAP13743.1| 238|Caenorhabditis elegans Hypothetical... 273 1e-73
AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical... 273 1e-73
AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical... 273 1e-73
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z72514-3|CAA96673.1| 741|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical ... 28 6.0
AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024775-4|AAK68453.4| 88|Caenorhabditis elegans Hypothetical ... 28 6.0
>AC024817-33|AAP13743.1| 238|Caenorhabditis elegans Hypothetical
protein Y54G2A.17c protein.
Length = 238
Score = 273 bits (669), Expect = 1e-73
Identities = 122/186 (65%), Positives = 152/186 (81%)
Frame = +3
Query: 96 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 275
M Q+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 1 MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 60
Query: 276 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 455
F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL +
Sbjct: 61 FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 120
Query: 456 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKY 635
GPL + QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY
Sbjct: 121 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 180
Query: 636 AYIGGF 653
YIGGF
Sbjct: 181 CYIGGF 186
Score = 34.3 bits (75), Expect = 0.092
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 683 KMFNIPVKGTHAHSFVTSF 739
K++ IPVKGT AHSF+ SF
Sbjct: 196 KLYGIPVKGTQAHSFICSF 214
>AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical
protein Y54G2A.17a protein.
Length = 543
Score = 273 bits (669), Expect = 1e-73
Identities = 122/186 (65%), Positives = 152/186 (81%)
Frame = +3
Query: 96 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 275
M Q+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 1 MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 60
Query: 276 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 455
F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL +
Sbjct: 61 FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 120
Query: 456 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKY 635
GPL + QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY
Sbjct: 121 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 180
Query: 636 AYIGGF 653
YIGGF
Sbjct: 181 CYIGGF 186
Score = 34.3 bits (75), Expect = 0.092
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 683 KMFNIPVKGTHAHSFVTSF 739
K++ IPVKGT AHSF+ SF
Sbjct: 196 KLYGIPVKGTQAHSFICSF 214
>AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical
protein Y54G2A.17b protein.
Length = 563
Score = 273 bits (669), Expect = 1e-73
Identities = 122/186 (65%), Positives = 152/186 (81%)
Frame = +3
Query: 96 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 275
M Q+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 21 MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 80
Query: 276 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 455
F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL +
Sbjct: 81 FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 140
Query: 456 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKY 635
GPL + QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY
Sbjct: 141 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 200
Query: 636 AYIGGF 653
YIGGF
Sbjct: 201 CYIGGF 206
Score = 34.3 bits (75), Expect = 0.092
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 683 KMFNIPVKGTHAHSFVTSF 739
K++ IPVKGT AHSF+ SF
Sbjct: 216 KLYGIPVKGTQAHSFICSF 234
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 255 GLEECMKFLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPR 434
G++ C+ FL++ D K +K+ LP ++P + + C D+ EGS P+
Sbjct: 260 GIKSCVNFLQD---PQRDAKSIKKELPVQVDPSTPRDNELMDCSDLSRWLFTEGSQTTPQ 316
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 480 LETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSAS 629
L+ L L +F++ ++ R + + K VSL ++ +RR+ G D G S S
Sbjct: 557 LDIDLGKLKDFSTPESSGNKRPSISSSKGVSLSDYRMRRSGGGDAGSSTS 606
>Z72514-3|CAA96673.1| 741|Caenorhabditis elegans Hypothetical
protein T10B10.3 protein.
Length = 741
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 264 ECMKFLENFHYSNSDIKYLKQT 329
EC K +E+FH N ++YL T
Sbjct: 335 ECFKVIESFHSDNMKLRYLVMT 356
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 480 LETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSAS 629
L+ L L +F++ ++ R + + K VSL ++ +RR+ G D G S S
Sbjct: 557 LDIDLGKLKDFSTPESSGNKRPSISSSKGVSLSDYRMRRSGGGDAGSSTS 606
>AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical
protein K10B4.4 protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 455 RSAHCGTAIGDHSANISQLCQFDGHER 535
RSA C T +GDH AN F GH+R
Sbjct: 343 RSAFCRTILGDHIANF----VFKGHQR 365
>AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical
protein C08E3.2 protein.
Length = 235
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 564 FYRPPSDISQRSWPSNWQ 511
FY PSD +QR W NW+
Sbjct: 44 FYYSPSDKNQRRWVFNWE 61
>AC024775-4|AAK68453.4| 88|Caenorhabditis elegans Hypothetical
protein Y41D4A.3 protein.
Length = 88
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 129 LTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 275
+T Y T + KS + +D + +LFF+T PF I + C+K
Sbjct: 39 ITMFYFHTAYPSVHKSNRSDDFPIIELFFQTLPFINYLQIIQIILPCLK 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,623,442
Number of Sequences: 27780
Number of extensions: 394775
Number of successful extensions: 949
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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