Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0086
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011389-1|AAR96181.1|  232|Drosophila melanogaster AT29354p pro...    29   9.2  
AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein...    29   9.2  
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA...    29   9.2  
AE014134-2923|AAN11001.1|  232|Drosophila melanogaster CG31787-P...    29   9.2  

>BT011389-1|AAR96181.1|  232|Drosophila melanogaster AT29354p
           protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 439 NLAQAVYVCVNKYK*SQFITLFSIGF 362
           N+A++ Y  VNK+  +QF+++  +GF
Sbjct: 184 NVAESTYSMVNKWSWAQFLSMIFVGF 209


>AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein
            protein.
          Length = 2162

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 586  AICHVINIVHTLRRNCRLW*AF-LNALCYVYNNCFRKAKA 702
            A+ HV  +V  LRR C LW  + +++L ++YN    +  A
Sbjct: 1728 AVQHVKLMVKELRRVCLLWDEYWIHSLAHIYNTYVSRVSA 1767


>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
            protein.
          Length = 3218

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 586  AICHVINIVHTLRRNCRLW*AF-LNALCYVYNNCFRKAKA 702
            A+ HV  +V  LRR C LW  + +++L ++YN    +  A
Sbjct: 1728 AVQHVKLMVKELRRVCLLWDEYWIHSLAHIYNTYVSRVSA 1767


>AE014134-2923|AAN11001.1|  232|Drosophila melanogaster CG31787-PA
           protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 439 NLAQAVYVCVNKYK*SQFITLFSIGF 362
           N+A++ Y  VNK+  +QF+++  +GF
Sbjct: 184 NVAESTYSMVNKWSWAQFLSMIFVGF 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,323,033
Number of Sequences: 53049
Number of extensions: 520947
Number of successful extensions: 758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)