Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0083
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 484 LHSFTQLMCK-IIVSFLCIR*KYIKYYRILRVNIQKSC*LAKGIVR*T 624
           L S   ++ K ++V+FL    K+IK  +I  + I K+C  A  +++ T
Sbjct: 277 LESLLYMVTKLVVVTFL----KFIKKIQIFGIMITKACMSASNLIQRT 320


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 263 LRVTINIIADDPNACELL*DFRKNY 337
           ++++INII  DPN  +L  +  ++Y
Sbjct: 136 IKLSINIILSDPNTNKLKLNTNESY 160


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -2

Query: 418 FFSVIQKKSFWESIGSVQLNRHSEYYKIIFTKVSQQF 308
           FFS ++ K   ES+   +   H E +  +  ++   F
Sbjct: 164 FFSKLKHKIVGESVIDEKAEEHKEQFTALVREIRNAF 200


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 554  LMYFYLMHKKLTIILHINCVNE*RLRSFFLI 462
            ++YF + HKK T    I   N  +L   F++
Sbjct: 1521 MLYFVIEHKKKTSTEWIQVSNNVKLGQNFVL 1551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,888
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)