Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0083
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0404 + 3071412-3071464,3073572-3074970                           30   1.4  
03_03_0031 + 13922727-13923004,13925052-13925184,13925505-13925666     28   7.4  

>11_01_0404 + 3071412-3071464,3073572-3074970
          Length = 483

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
 Frame = -2

Query: 415 FSVIQKKSFWESIGSVQLNR----HSEYYKIIFTKVSQQFTRIR-IIGNDIYCNTQKMQN 251
           +S++QKK  W++I  V   R      +  +  F  +++++ R+  I+G    CN   ++N
Sbjct: 193 YSMMQKKGKWKAISKVMGERGCHVSPQQCEDKFNDLNKRYKRLTDILGRGTACNV--VEN 250

Query: 250 RTKLDGQLKSQRQDEHPAATLNMLH 176
            + LD    S++  E     LN  H
Sbjct: 251 HSLLDHMDISEKMKEDARKILNSKH 275


>03_03_0031 + 13922727-13923004,13925052-13925184,13925505-13925666
          Length = 190

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 14  PEFNDVTKEFTKQDFRFERRLHY-EVVILRVSI*LELSATKRSCS 145
           P F+ V  E  K DF   R LH  E+  L + I L + A   +CS
Sbjct: 63  PAFDGVALELAKLDFELVRSLHLRELKALTLHIRLGVRAPSPTCS 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,430,731
Number of Sequences: 37544
Number of extensions: 259336
Number of successful extensions: 427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)