Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0082
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY093423-1|AAM18800.2|  482|Drosophila melanogaster PARKIN protein.    29   8.2  
AY058754-1|AAL13983.1|  482|Drosophila melanogaster SD01679p pro...    29   8.2  
AF510072-1|AAM43930.1|  482|Drosophila melanogaster PARKIN protein.    29   8.2  
AE014296-3479|AAN12155.1|  482|Drosophila melanogaster CG10523-P...    29   8.2  
AE014296-3478|AAN12154.1|  482|Drosophila melanogaster CG10523-P...    29   8.2  

>AY093423-1|AAM18800.2|  482|Drosophila melanogaster PARKIN protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 96  YCDCRAGDRSFCAIPTFIFILPC 164
           YC  R G+R F   P F + LPC
Sbjct: 288 YCRSRLGERQFMPHPDFGYTLPC 310


>AY058754-1|AAL13983.1|  482|Drosophila melanogaster SD01679p
           protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 96  YCDCRAGDRSFCAIPTFIFILPC 164
           YC  R G+R F   P F + LPC
Sbjct: 288 YCRSRLGERQFMPHPDFGYTLPC 310


>AF510072-1|AAM43930.1|  482|Drosophila melanogaster PARKIN protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 96  YCDCRAGDRSFCAIPTFIFILPC 164
           YC  R G+R F   P F + LPC
Sbjct: 288 YCRSRLGERQFMPHPDFGYTLPC 310


>AE014296-3479|AAN12155.1|  482|Drosophila melanogaster CG10523-PC,
           isoform C protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 96  YCDCRAGDRSFCAIPTFIFILPC 164
           YC  R G+R F   P F + LPC
Sbjct: 288 YCRSRLGERQFMPHPDFGYTLPC 310


>AE014296-3478|AAN12154.1|  482|Drosophila melanogaster CG10523-PB,
           isoform B protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 96  YCDCRAGDRSFCAIPTFIFILPC 164
           YC  R G+R F   P F + LPC
Sbjct: 288 YCRSRLGERQFMPHPDFGYTLPC 310


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,822,172
Number of Sequences: 53049
Number of extensions: 504146
Number of successful extensions: 778
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)