Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0082
         (712 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3...    28   5.3  

>At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3)
           identical to Cytochrome P450 98A3 (SP|O22203)
           [Arabidopsis thaliana]; similar to gi:17978651 from
           Pinus taeda
          Length = 508

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -1

Query: 253 INNVYGVNTATFRSFQRWHQNNFSEIASNWQGKI-KIKVGIAQNERSPARQSQ*QSHFER 77
           + N+Y +    FR +  W Q ++  I S W G I  + V  A+  +   ++   Q   +R
Sbjct: 37  VGNLYDIKPVRFRCYYEWAQ-SYGPIISVWIGSILNVVVSSAELAKEVLKEHD-QKLADR 94

Query: 76  HCH*GRKMFS 47
           H +   + FS
Sbjct: 95  HRNRSTEAFS 104


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,219,342
Number of Sequences: 28952
Number of extensions: 245933
Number of successful extensions: 484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)