Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0080
         (324 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   1.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   3.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   3.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   6.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    21   8.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 65  AA*SIPDV*HHEVWLHRRAEDLH 133
           AA + P    + VW HR   DLH
Sbjct: 889 AAAAAPTASRYAVWAHRMIPDLH 911


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 138 LNTMGQLFDDSELQALIDENDPENS 212
           +N + ++ D +E QA + E+DPE++
Sbjct: 109 MNAVMRIMDSAE-QAALSESDPESA 132


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 299 FFQFLCMASASSLQGNGSNITEAIKVDLPTVFRIVFIDECL 177
           F   + +A  +    + SN T A    +  +F ++F  EC+
Sbjct: 124 FANCVALAVYTPFPNSDSNSTNAALEKIEYIFLVIFTAECI 164


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 275 SASSLQGNGSNITEAIKVDLP 213
           S+SS   N SNI+   +V+LP
Sbjct: 201 SSSSTNNNTSNISNRNQVNLP 221


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 70  VKHSRCLTPRSLVTSTC*RSPPFSTQWDSYSMTQ 171
           ++ SRC+T   L+ S C  +    T  D YS  Q
Sbjct: 59  MRKSRCMTKHELLESKC-NALKIETN-DDYSFLQ 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,703
Number of Sequences: 2352
Number of extensions: 6413
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)