Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0078
         (504 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.002
UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.002

>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -1

Query: 252 M*KFKILICSTLKIFHDLSSTRCEPGWFLS 163
           M K K  +CST +I HDLS  RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = -2

Query: 359 LIKKKNSLRDTRVIXXXXXXXXXXFRPPCWIKIKF*CKSLKF*SVRPLKFSMI 201
           +I + + LRD  VI           RP CWIKI   C+SL + SVRPLK  MI
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,676,950
Number of Sequences: 1657284
Number of extensions: 4758504
Number of successful extensions: 6001
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5997
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)