Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0075
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665...    33   0.17 
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507...    30   1.6  
07_03_1587 + 27937243-27937251,27937813-27937872,27938007-279380...    28   6.4  

>01_06_0903 +
           32862551-32864752,32865341-32865535,32866219-32866523,
           32866664-32866849,32867137-32867314,32867548-32867574
          Length = 1030

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +2

Query: 179 FPDTPNRTTTVAVGDRFGDDDSTTPRLPIEANGDLELI 292
           F D P R T  A    FG DDS+ PRL  E N  L+ +
Sbjct: 661 FSDNPRRQTIAAAASLFGADDSSNPRLD-ELNKTLQAL 697


>10_08_0971 -
           21949721-21949936,21950051-21950484,21950599-21950791,
           21950909-21951007,21951114-21951191,21951275-21951669,
           21954317-21954482,21954840-21954927,21955015-21955127,
           21955242-21955426,21955840-21955987,21956071-21956349,
           21956425-21956529,21956892-21957137,21957367-21957408,
           21957539-21957613
          Length = 953

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 566 VTNVKPTSTVANKPGAESTVTAEPYSLQWFVNHYS 670
           V+ +KP  T  N P A S++  EPY L W  ++ S
Sbjct: 595 VSAMKPKDTNVNGP-ASSSIKVEPYKLSWMQDYAS 628


>07_03_1587 +
           27937243-27937251,27937813-27937872,27938007-27938008,
           27938208-27939012
          Length = 291

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 139 VSATLLRRIKADWIPGYT*QDHHRSCRRQI 228
           +   L+ RI A+W PG +  +H R   R+I
Sbjct: 210 IPTPLVMRIMAEWYPGASADEHRRVVEREI 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,448,866
Number of Sequences: 37544
Number of extensions: 378891
Number of successful extensions: 953
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)