Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0075
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ...    29   3.3  
Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1 prot...    29   4.4  
X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.     29   4.4  
U58726-4|AAB00578.1|  408|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical...    29   4.4  
Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC006695-17|AAF39983.2|  327|Caenorhabditis elegans Hypothetical...    28   5.8  
Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical p...    28   7.7  
AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
           protein F55A3.3 protein.
          Length = 1030

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 279 SPFASIGSLGVVESSSPNLSPTATVVVLL 193
           SPFA +G  GV   S+  L PTA+ +V L
Sbjct: 799 SPFAGLGFFGVPYRSATTLKPTASCLVNL 827


>Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1
           protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 275 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 412
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 275 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 412
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>U58726-4|AAB00578.1|  408|Caenorhabditis elegans Hypothetical
           protein T01C8.5 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 222 SPTATVVVLLGVSGNPIGLDPAKE 151
           +P  +V++L G + NP G+DP +E
Sbjct: 173 APEKSVIILHGCAHNPTGMDPTQE 196


>AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical
           protein Y54G11A.5 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 275 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 412
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>Z79757-9|CAB02123.3|  327|Caenorhabditis elegans Hypothetical
           protein F55B12.2 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 112 IADLIYTGAVSATLLRRIKADWIPGYT*QDHHRSCRR 222
           + D++YT  VS TL+ +I  + + G T    H+S  R
Sbjct: 241 LTDILYTNRVSDTLITKISNESMTGETLHGTHKSVGR 277


>AC006695-17|AAF39983.2|  327|Caenorhabditis elegans Hypothetical
           protein W06H8.6 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 140 CQRPSFAGSRPIGFPDTPNRTTTVAVGDRFGDDDSTTPRLPIEANGDLELIDRLSKLPVD 319
           C   S     P+  P +   TTT +  D F +   + P +P+  NG  +  D LS  P++
Sbjct: 8   CPTSSLVSHSPV--PSSTKSTTTTS--DLFQEHPKSQP-IPVRNNGQWDNSDHLSCSPLE 62

Query: 320 KQP 328
           + P
Sbjct: 63  RFP 65


>Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical
           protein R10D12.10 protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 369 RTHKPTCRGLTDS*IPSCPVKTL--LPPKQTQTQCRQYRAAGHRTPHRPVAR 518
           +T + T    + + +P    K +  LPPKQ  T+     +  H+TP  P+ +
Sbjct: 420 KTTERTSEAPSTNALPKAKPKKIRTLPPKQKHTKTSSTSSVSHQTPPSPIKK 471


>AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.5 protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +2

Query: 233 DDDSTTPRLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRK 370
           +D++   +L  ++ G L+L+D  S LP  K+    + W+  +   K
Sbjct: 316 EDEAVVAQLLRDSKGSLKLVDTSSLLPELKRETGVVQWKVFDRDMK 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,342,733
Number of Sequences: 27780
Number of extensions: 310216
Number of successful extensions: 758
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)