Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0073
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0675 + 26630466-26632070                                         29   4.1  
04_01_0531 - 6934736-6935068,6935079-6935135                           28   9.4  

>03_05_0675 + 26630466-26632070
          Length = 534

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 427 SPPYSKLSLSFNCHNKPAATDFWANPMSLRLH 332
           +PP S  +LS +C N  A T +W  P  +  H
Sbjct: 195 APPPSGAALSSSCFNDMAGTPYWMAPEVIHSH 226


>04_01_0531 - 6934736-6935068,6935079-6935135
          Length = 129

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 694 KPYTINRSLMLLVYCKSTRSRPTKLAVRMYATPLSLH 584
           KP TI+ ++++ + CKS RSR   L     AT +S H
Sbjct: 4   KPLTIDENVVMRISCKSRRSRHDALV----ATTISQH 36


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,497
Number of Sequences: 37544
Number of extensions: 335442
Number of successful extensions: 944
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)