Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0072
         (513 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NNM2 Cluster: Uncharacterized protein C20orf58; n=1; ...    35   1.2  
UniRef50_A7P6B2 Cluster: Chromosome chr9 scaffold_7, whole genom...    34   1.7  
UniRef50_UPI0000F2EC65 Cluster: PREDICTED: hypothetical protein,...    33   3.8  
UniRef50_UPI000023D455 Cluster: predicted protein; n=1; Gibberel...    32   8.8  
UniRef50_Q6IQS1 Cluster: N-acetylglucosamine-1-phosphate transfe...    32   8.8  

>UniRef50_A6NNM2 Cluster: Uncharacterized protein C20orf58; n=1;
           Homo sapiens|Rep: Uncharacterized protein C20orf58 -
           Homo sapiens (Human)
          Length = 174

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
 Frame = -3

Query: 484 GATKHWSWRVAAGAAPGRSQSLAFT*LIS------SLKQKAEQRISERVNVCRSCGVRWR 323
           G  +H  W ++ G  PGR  S      +       SLK+K E++  +R        + W+
Sbjct: 32  GGRQHLPWVLSTGHQPGRQGSATAGCSVKRVCNFLSLKKKKEKKTYKRKGKTPHAHLLWQ 91

Query: 322 ASADLSAPRVLQQR-AQPSGVS-GLL 251
                SAPR+  +R A PSG   GLL
Sbjct: 92  HGGHSSAPRLSSRRGAPPSGAHLGLL 117


>UniRef50_A7P6B2 Cluster: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence; n=2; Magnoliophyta|Rep: Chromosome
           chr9 scaffold_7, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 239

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 24/97 (24%), Positives = 44/97 (45%)
 Frame = -3

Query: 505 CCLKS*MGATKHWSWRVAAGAAPGRSQSLAFT*LISSLKQKAEQRISERVNVCRSCGVRW 326
           CCL+      K  +W V    A   +QS      I  ++   E+++ +R+ V       W
Sbjct: 135 CCLRYQREEAKIQAW-VNLQKAKAEAQSRKLEVKIQKMRSNLEEKLMKRMAVVHRKAEEW 193

Query: 325 RASADLSAPRVLQQRAQPSGVSGLLYKYRSSYLGVSS 215
           RASA +     +Q+ A+ +    +L ++ S++   SS
Sbjct: 194 RASAQVQHSEQIQRAAEQA--QKMLNQHNSNFSAHSS 228


>UniRef50_UPI0000F2EC65 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Monodelphis domestica|Rep: PREDICTED:
           hypothetical protein, partial - Monodelphis domestica
          Length = 342

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +2

Query: 344 PTHVHSLRDPLFCFLFQARYKLGKC*GLTAAGSGAGCHAPRPMFRRPHLRLQTAR 508
           P H   +  PL   L    ++LG+C G+     G GC AP     RP  R Q  R
Sbjct: 231 PVHGPGVSLPLSGPLLLPHWRLGRCDGVWGGPGGGGCTAPAARGLRPGSRGQDPR 285


>UniRef50_UPI000023D455 Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 484

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 210 YDDDTPR*EDRYL*RSPLTPLGCARCCRTRGAERSADARHRTPHD--RHTFTRSEIRCSA 383
           YD  +   +  ++  + L P G     +  G+  ++D    T HD  + T  +S ++C  
Sbjct: 275 YDPTSDADQTAFVSLTHLEPAGPMESLKLMGSLDTSDFSPHTTHDFDKETLQQSSLQCVV 334

Query: 384 FCFRLD 401
            CF+LD
Sbjct: 335 ICFQLD 340


>UniRef50_Q6IQS1 Cluster: N-acetylglucosamine-1-phosphate
           transferase, gamma subunit; n=13; Euteleostomi|Rep:
           N-acetylglucosamine-1-phosphate transferase, gamma
           subunit - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 275

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +2

Query: 248 VEEPANAAGLCSLLQDPRSREVGRRAPSHTARPTHVHSLRDPLFCFLFQARYKLGKC 418
           VEEP N  GL + L    SR   + +PS  + P H+H L    F ++ +A YK   C
Sbjct: 4   VEEP-NTFGLNNPLVSQTSRLQAKVSPSPVSGPPHLHRLAGKCFNYI-EATYKYVFC 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,200,664
Number of Sequences: 1657284
Number of extensions: 7745691
Number of successful extensions: 23149
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23139
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)