Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0072
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0933 - 33161687-33162205,33162290-33162376,33162459-331626...    27   8.8  

>01_06_0933 -
           33161687-33162205,33162290-33162376,33162459-33162695,
           33162778-33162886,33162997-33163313,33163398-33163607,
           33165380-33165901
          Length = 666

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 312 SADARHRTPHDRHTFTRSEIRCSA 383
           +AD ++ T H R+TFT   +R SA
Sbjct: 572 AADVKYVTQHFRYTFTNDRVRRSA 595


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,885
Number of Sequences: 37544
Number of extensions: 232664
Number of successful extensions: 796
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)