Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0071
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +3

Query: 246 FLISAVGYILNS*FIFHFCQIMSYPIIFVFVISSYYICTYCINDI 380
           F +SA  Y++++  ++    ++++   F F+++  YIC  C N +
Sbjct: 253 FYMSA--YLISNPIMWDRVMLLTFWSAF-FIVNVLYICNQCYNTV 294


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 601 GVPHPDVSLSPPT 563
           G+P P  S SPPT
Sbjct: 223 GIPTPSTSASPPT 235


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 675 FLIKNFGNV*WAYLHRVTY 619
           F  K+F N+ W + H V++
Sbjct: 386 FTAKDFFNLDWTFCHMVSH 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,283
Number of Sequences: 336
Number of extensions: 3289
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)