Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0071
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL023835-9|CAA19493.2|  397|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/49 (22%), Positives = 24/49 (48%)
 Frame = +2

Query: 191 IVHVLSKLYYVPFNCFLTFSH*CGWVYFKLIIHISFLSNNVISNYFCFC 337
           + H+ S   YV  N F    +   W+Y  + +  + ++ + ++N+  FC
Sbjct: 279 VSHIPSACLYVYINLFHNVLYSTRWMYTSVQVSTTVVTCSKVANFILFC 327


>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +2

Query: 179 FI*RIVHVLSKL-YYVPFNCFLTFS 250
           F+ RIV ++ +L +Y+P  CF +FS
Sbjct: 137 FVYRIVKIIMELIHYIPLQCFSSFS 161


>AL023835-9|CAA19493.2|  397|Caenorhabditis elegans Hypothetical
           protein Y37A1B.10 protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 45  HLRYYVYSILFSTYSVNSMYSNIL*FYIYT*IH-FLHLTYELFFK 176
           H+ Y     + STY  N MY     +YI    H + H+  EL  +
Sbjct: 84  HINYVYIDTIISTYLHNKMYEGYKCWYISRVTHGYFHVLCELLMR 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,323,141
Number of Sequences: 27780
Number of extensions: 260113
Number of successful extensions: 484
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)