Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0070
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39285| Best HMM Match : Proteasome (HMM E-Value=0) 258 3e-69
SB_47434| Best HMM Match : Proteasome (HMM E-Value=4.3e-17) 87 2e-17
SB_31216| Best HMM Match : Proteasome (HMM E-Value=2.8e-35) 61 9e-10
SB_40821| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40084| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_46004| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_41821| Best HMM Match : Borrelia_orfA (HMM E-Value=2.7) 31 0.60
SB_37203| Best HMM Match : HALZ (HMM E-Value=6.6) 29 4.2
SB_287| Best HMM Match : Pentapeptide (HMM E-Value=0.1) 28 5.6
SB_24503| Best HMM Match : Transket_pyr (HMM E-Value=0) 28 7.4
SB_5769| Best HMM Match : COX2_TM (HMM E-Value=4.5) 27 9.7
SB_21938| Best HMM Match : Big_2 (HMM E-Value=0.69) 27 9.7
>SB_39285| Best HMM Match : Proteasome (HMM E-Value=0)
Length = 215
Score = 258 bits (632), Expect = 3e-69
Identities = 121/164 (73%), Positives = 137/164 (83%)
Frame = +2
Query: 80 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 259
MS YDRAITVFSPDGHL QVEYAQEAV+KGSTA E+K+VAKLQE RT
Sbjct: 1 MSGSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNIVVLGVERKAVAKLQEPRT 60
Query: 260 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 439
VRKIC LDDHV+MAFAGLTADARIL+N+A++ECQSHKLTVEDPVTLEYITR+IA LKQ+Y
Sbjct: 61 VRKICTLDDHVLMAFAGLTADARILVNKARVECQSHKLTVEDPVTLEYITRFIATLKQRY 120
Query: 440 TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATG 571
TQSNGRRPFGIS LI GFD+DG+P L+QT+PSG Y+ WK +G
Sbjct: 121 TQSNGRRPFGISTLIVGFDFDGTPRLYQTDPSGTYHAWKVVQSG 164
>SB_47434| Best HMM Match : Proteasome (HMM E-Value=4.3e-17)
Length = 308
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/127 (34%), Positives = 68/127 (53%)
Frame = +2
Query: 89 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 268
RYD + + FSPDG + QVEYA +AV TA EK ++KL E ++
Sbjct: 136 RYDLSASQFSPDGRVFQVEYANKAVENSGTAIAIRCKDGVVFGVEKLVLSKLYEYGANKR 195
Query: 269 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 448
I +D H+ MA AGL AD+R ++ A+ E +++ P+ L+Y+ ++G +T
Sbjct: 196 IFHIDTHIGMAIAGLIADSRQIVATAREEAANYRSVYGSPIPLKYLVNRVSGFIHAFTLY 255
Query: 449 NGRRPFG 469
+ RPFG
Sbjct: 256 SAMRPFG 262
>SB_31216| Best HMM Match : Proteasome (HMM E-Value=2.8e-35)
Length = 224
Score = 60.9 bits (141), Expect = 9e-10
Identities = 30/97 (30%), Positives = 51/97 (52%)
Frame = +2
Query: 317 ADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFD 496
AD+R + RA+ E + K + ++ + + IA + Q YTQ+ RP G ++ G D
Sbjct: 63 ADSRSQVQRARYEAANWKYKFGYEIPVDMLCKRIADISQVYTQNAEMRPLGCGMILIGID 122
Query: 497 YDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK 607
+ P L++T+P+G + +KA + G FLEK
Sbjct: 123 EEKGPQLYKTDPAGYFCGFKACSVGVKQTEANSFLEK 159
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 83 SARYDRAITVFSPDGHL 133
SA +DR IT+FSP+G L
Sbjct: 6 SAGFDRHITIFSPEGRL 22
>SB_40821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 500 DGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK 607
D PH+FQT PS Y++ KA A G +++ R +LEK
Sbjct: 1 DMGPHIFQTCPSANYFDCKAMAIGARSQSARTYLEK 36
>SB_40084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 452 GRRPFGISCLIGGFDYDGSPHLFQTEPS 535
G RPFG+S L+ G+D D P+LFQ +PS
Sbjct: 2 GVRPFGVSLLVAGWD-DDRPYLFQCDPS 28
>SB_46004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 83 SARYDRAITVFSPDGHLLQVEYAQEAVRK 169
SA +DR IT+FSP+G L QV ++ V++
Sbjct: 6 SAGFDRHITIFSPEGRLYQVADSRSQVQR 34
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 317 ADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFG 469
AD+R + RA+ E + K + ++ + + +A + Q YTQ+ RP G
Sbjct: 26 ADSRSQVQRARYEAANWKYKFGYEIPVDMLCKRVADISQVYTQNAEMRPLG 76
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 548 HNIYQKVQFGTSVVNHHSRILLSNTKYQMVDDHCSEYIS 432
HN+ + Q +VV R++ +NT+Y++ +DH E I+
Sbjct: 602 HNVSEDKQGDVTVVTKTKRVVTNNTRYEIKNDHEPETIT 640
>SB_41821| Best HMM Match : Borrelia_orfA (HMM E-Value=2.7)
Length = 616
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -2
Query: 337 Y*YTSVCCQSGKCHYDVIIQKTYFPHSSFFLQFSNRFFLNT*DYHIDSSNSNCC*PLSDS 158
Y +T C H+ +Q +++P S FFL + R + +HI+ S N P
Sbjct: 18 YKFTGFCAIEAPHHFYESLQPSFYPDSKFFLLSTLRLLIME-KFHINYSTKNIPLPSRSD 76
Query: 157 FL 152
+L
Sbjct: 77 YL 78
>SB_37203| Best HMM Match : HALZ (HMM E-Value=6.6)
Length = 107
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 262 HSSFFLQFSNRFFLNT*DYHIDSSNSNCC*PLS 164
H + +L NR N D HIDS++SNC P+S
Sbjct: 53 HHASWLDCGNRTE-NNGDLHIDSASSNCLQPVS 84
>SB_287| Best HMM Match : Pentapeptide (HMM E-Value=0.1)
Length = 288
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 292 RNGICRIDSRRSYINKPCTNRMSITQVNSRGSSNIGVYYKIHS 420
R + R R+Y+ + R ITQ + G N G++ HS
Sbjct: 245 RTHLSRTRVTRTYLTRTRVTRTRITQFGNSGDLNSGIWKSCHS 287
>SB_24503| Best HMM Match : Transket_pyr (HMM E-Value=0)
Length = 562
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 281 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGR 457
DDHV++ AG+T D + +E + + + DP T++ I + AG+ +NG+
Sbjct: 441 DDHVLVIAAGVTLDEAMKAAN-HLELEGIHVRILDPFTVKPIDK--AGIVANAKAANGK 496
>SB_5769| Best HMM Match : COX2_TM (HMM E-Value=4.5)
Length = 152
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 481 QTRNTKWSTTIALSIFLFETCYVSCNILQC 392
Q K + T+A++IFL+ C V C ++ C
Sbjct: 39 QRNENKAAVTVAITIFLYGLCLVPC-VMYC 67
>SB_21938| Best HMM Match : Big_2 (HMM E-Value=0.69)
Length = 651
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +2
Query: 359 QSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSG 538
Q H +T V + ++ + + G++ +N +S G+ D SP F G
Sbjct: 59 QGHTITYSKDVVMVHVVQ-LGGVRISSATTNLVTGTQVSLFATGW-MDESPFAFANAVPG 116
Query: 539 IYYEWKAN 562
+ + WK+N
Sbjct: 117 LVFNWKSN 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,798,724
Number of Sequences: 59808
Number of extensions: 382894
Number of successful extensions: 871
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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