Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0070
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 127 6e-30
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 123 1e-28
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 106 1e-23
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 40 0.001
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.1
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 2.1
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 2.1
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 262 bits (643), Expect = 1e-70
Identities = 120/183 (65%), Positives = 149/183 (81%)
Frame = +2
Query: 89 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 268
RYDRAIT+FSPDGHL QVEYAQEAV+KGSTA EKKS+ LQ++RT+RK
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 269 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 448
I ++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 449 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 628
GRRPFGIS LIGGFD+DG+P LF+TEPSG YYE+ ANATGR K VRE+LE+ Y+ +
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENT 182
Query: 629 ATE 637
E
Sbjct: 183 VDE 185
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 127 bits (307), Expect = 6e-30
Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Frame = +2
Query: 71 FLTMSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQE 250
FLT S YDR + FSP+G L QVEYA EAV+ GST+ EK+S +KL
Sbjct: 2 FLTRS-EYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 251 ERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLK 430
+ KI +D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +T+ +A L
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 431 QKY----TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREF 598
++ +++ RPFG++ L G D +G+ LF +PSG + + KA + G ++ +
Sbjct: 121 LQFGDDDVKASMSRPFGVAMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGAASDGAEQN 179
Query: 599 LEKNY 613
L++ Y
Sbjct: 180 LKEQY 184
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 123 bits (296), Expect = 1e-28
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Frame = +2
Query: 80 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 259
M+ RYD T+FSP+G L QVEYA EA+ T E+K+V KL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 260 V-RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 436
+ K+ L D++ AG+TADA ILIN + S++ + + + +E + + + KQ+
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 437 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 613
YTQ G+RPFG+S L G+D L+Q++PSG Y WKA G + + L++ Y
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY 179
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 113 bits (271), Expect = 1e-25
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Frame = +2
Query: 80 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 259
M Y ++T FSP G L+Q+EYA AV+ G + E ++
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPK 60
Query: 260 VRKICLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQK 436
V +I H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+
Sbjct: 61 VEQI---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQE 116
Query: 437 YTQSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 613
YTQS G RPFG S LI G+D + G P LFQ +PSG Y+ WKA A G++ + FLEK +
Sbjct: 117 YTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRF 176
Query: 614 T 616
+
Sbjct: 177 S 177
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 106 bits (255), Expect = 1e-23
Identities = 61/182 (33%), Positives = 94/182 (51%)
Frame = +2
Query: 89 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 268
+YD +TV+SP G L QVEYA EA+++GS K++ L + +K
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KK 62
Query: 269 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 448
+ +D H ++ AGL +D RIL Q EC S + + V ++ + + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 449 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 628
GRRPFG+ LI G+D DG+ H+ QT+PS + G +++ R +LE+N E
Sbjct: 123 YGRRPFGVGILIAGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEK 181
Query: 629 AT 634
+T
Sbjct: 182 ST 183
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 83.4 bits (197), Expect = 1e-16
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Frame = +2
Query: 83 SARYDRAITVFSPDGHLLQVEYAQEAVRKGS-TAXXXXXXXXXXXXXEKKSVAKLQEERT 259
SA +DR IT+FSP+G + QVEYA +A+ + TA +K+ L T
Sbjct: 6 SAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADT 65
Query: 260 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 439
V + + V G+ DA+ I RAQ E S K + E + + +A L Q Y
Sbjct: 66 VTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY 125
Query: 440 TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK 607
TQ+ R G + L +D + P +++ +P+G Y K + G FLEK
Sbjct: 126 TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEK 181
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 79.4 bits (187), Expect = 2e-15
Identities = 52/172 (30%), Positives = 78/172 (45%)
Frame = +2
Query: 92 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 271
YD A + FSPDG + QVEYAQ+AV T +K +KL + ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 272 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 451
++D+V +A AG D L N A E +P+ ++ I +A +T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 452 GRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK 607
RPFG ++ LF EPSG+ YE+KA A G+ + + +EK
Sbjct: 128 S-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK 178
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 1/157 (0%)
Frame = +2
Query: 146 YAQEAVRKGSTAXXXXXXXXXXXXXEKK-SVAKLQEERTVRKICLLDDHVVMAFAGLTAD 322
Y QE + G+T + + S R KI + D++V+ +G AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 323 ARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYD 502
+ + + A+ + +T PVT+ ++ Y R S L+ G+D +
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNY-----REQLSASVLVAGWDEE 129
Query: 503 GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 613
++ G ++ A+G + V+ FL+ +
Sbjct: 130 LGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQW 166
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 380 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 547
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +2
Query: 254 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 433
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 434 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 604
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +2
Query: 254 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 433
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 434 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 604
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 571 TSCISFPFIIYT--RRFSLEQVW*TIIVESSYQTRNT 467
+SCI F F++YT RF + VW T+ E YQ + T
Sbjct: 19 SSCIVFGFVLYTFAPRFHTKIVWDTLDGE-GYQFKET 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,895
Number of Sequences: 27780
Number of extensions: 308454
Number of successful extensions: 752
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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