Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0063
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496...    29   3.7  

>01_06_0270 +
           28048449-28048577,28048915-28048978,28049537-28049638,
           28049971-28050021,28050075-28050172,28050395-28050485,
           28050718-28050782,28050913-28051107,28051207-28051326,
           28051592-28051662,28051787-28052012,28052330-28052407,
           28052507-28052735,28052958-28053097,28053571-28053699
          Length = 595

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 277 TNYHFSTYILMKQTQNVIYSKHIQAFVVSRYPGTVSLAPKRIHCGAAMHARTHK 116
           T Y +  + +  +    + SKH+++ + SR PG  SL  K I   A + A  H+
Sbjct: 245 TEYKYLAHRMGSEHLAKMLSKHLESVIKSRIPGIQSLISKAI---AELEAELHR 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,248,618
Number of Sequences: 37544
Number of extensions: 282096
Number of successful extensions: 585
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)