Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0061
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot...    29   5.1  
AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p pro...    29   8.8  
AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA...    29   8.8  
AE014296-2116|AAF49941.2|  383|Drosophila melanogaster CG5626-PA...    29   8.8  

>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
           protein.
          Length = 1910

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
 Frame = -2

Query: 733 QPFIL*KSTRSLLKFIIIHVSIN-----FDSIIYSYKLFFLFYETIVFML-LQFFLEL-- 578
           +P I+ +  R  LKF +    IN         IY+  LFFLF+ ++  +L +QFF EL  
Sbjct: 143 RPLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQFFGELKN 202

Query: 577 HC 572
           HC
Sbjct: 203 HC 204


>AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p protein.
          Length = 1237

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 700  LLKFIIIHVSINFDSIIYSYKLFFLFYETIVFMLLQFFLELH 575
            L + +++H   ++ S+  S  + + FY+ IVFM + F  + H
Sbjct: 976  LKRLLLVHG--HYHSVRLSLLVLYFFYKNIVFMGIMFLFQFH 1015


>AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA
            protein.
          Length = 1342

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 700  LLKFIIIHVSINFDSIIYSYKLFFLFYETIVFMLLQFFLELH 575
            L + +++H   ++ S+  S  + + FY+ IVFM + F  + H
Sbjct: 1081 LKRLLLVHG--HYHSVRLSLLVLYFFYKNIVFMGIMFLFQFH 1120


>AE014296-2116|AAF49941.2|  383|Drosophila melanogaster CG5626-PA
           protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 163 LVPSIH-AYHFVFKQIDFNRYQSYFELWAYSRSTFSSFKHYVPK 35
           LV SI  AY  +  +++  RY +Y    A SRS +   KH  PK
Sbjct: 132 LVVSIEQAYVLLLGELESERYTNYLVYSALSRSGYIVVKHVPPK 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,509,139
Number of Sequences: 53049
Number of extensions: 447343
Number of successful extensions: 877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)