Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0061
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68493-9|CAA92796.1|  338|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine re...    29   2.6  
AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine re...    28   6.1  
Z66500-8|CAE17939.1|  312|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z68493-9|CAA92796.1|  338|Caenorhabditis elegans Hypothetical
           protein C33A12.13 protein.
          Length = 338

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -2

Query: 679 HVSINFD-SIIYSYKLFFLFYETIVFMLLQFFLEL--HCRDQYFFKLKIFFSRYNNIGSK 509
           HV +    S+I+SY  FF  Y  I F     F     +    ++ KL IFFS Y N  + 
Sbjct: 70  HVFLTLSLSLIFSYLFFFFDYLNIRFPATGLFTSFCANIEPNHWLKLIIFFSFYFNYSAM 129

Query: 508 V 506
           +
Sbjct: 130 I 130


>AF016446-6|AAC24162.1|  322|Caenorhabditis elegans Serpentine
           receptor, class h protein20 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 649 YSYKLFFL-FYETIVFMLLQFFLELHCRDQYFFKL 548
           Y+  LF L F +T +F + +FFL  H  D  FF+L
Sbjct: 26  YALALFSLIFIKTKIFAIYRFFLIWHVLDNLFFEL 60


>AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical
           protein Y105C5A.1 protein.
          Length = 767

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 528 YRLKKIFNLKKYWSLQCN-SKKNCNNMK 608
           YR +K F  ++ + + CN ++K CNN+K
Sbjct: 474 YRFRKFFKYQEKYGVVCNCAEKLCNNLK 501


>AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical
           protein F54E2.5 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = -2

Query: 691 FIIIHVSINFDSIIYSYKLFFLFYETIVFMLLQFFLELHCRDQYFFKLKIF 539
           F+++++ +NF SIIY + +       IV ++L   +  +C+ +Y  K KI+
Sbjct: 512 FLVLNIFLNFSSIIYIWLMSVWVLALIVEIIL---ITSNCKYRYENKSKIY 559


>AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine
           receptor, class h protein23 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -2

Query: 703 SLLKFIIIHVSINFDSI-IYSYKLFFLFY-ETIVFMLLQFFLELHCRDQYFFKL 548
           S L F I   SI+F S+  Y   LF LF+ ++ VF+  ++FL  H  +  FF++
Sbjct: 7   SPLIFRIFTHSIHFVSLPTYFLALFSLFFIKSKVFVTYRYFLLWHVFENLFFEM 60


>Z66500-8|CAE17939.1|  312|Caenorhabditis elegans Hypothetical
           protein T05C12.11 protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 89  FEIRLVSVKIDLFKYKVIRVNRWYEMSI 172
           FEI+    + D+ + K+IRVN W+++ +
Sbjct: 25  FEIKKEYFQTDVIQEKLIRVNEWHDIPV 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,726,960
Number of Sequences: 27780
Number of extensions: 272269
Number of successful extensions: 591
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)