Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0060
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24HN6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q22HE2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  
UniRef50_A4VEN5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q24HN6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 407

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = -3

Query: 356 SNTSSNAMEFRTEREIDIQNESYLKIVSNYLESQSGNTFIC 234
           SN ++N++ ++T+REI + N    K+V  ++ S +G+  IC
Sbjct: 183 SNATANSLCYQTDREIFLINYKTTKVVRMFVLSNTGDGMIC 223


>UniRef50_Q22HE2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 697

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = -3

Query: 305 IQNESYLKIVSNYLESQSGNTFICLIYSFVQFVFYHYYRATPTIYSFDFS*LRPDRCLAL 126
           ++ E  +KI+ +YL+S   N  +C+    + F F  +Y  T  I S  F          L
Sbjct: 149 LKQEEAIKILKDYLQSLDENNLVCVFCDRILFTF-SFYNDTSKILSSFFQKYLQYIVTNL 207

Query: 125 VRMFLKYT*CYELKKSNYIFNLK 57
           +R F+      +L+  + + NL+
Sbjct: 208 IREFMDLINLKDLEDPSIMTNLQ 230


>UniRef50_A4VEN5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 964

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 371 LSRDISNTSSNAMEFRTEREIDIQNESYLKIVSNYLESQSGNTFICLIYS-FVQFVFY 201
           L +DI  T    + F  ++E D QNE  +  V +  + Q+G     LIYS F  F+ Y
Sbjct: 748 LGKDIGMTCETLLGFMLKKEEDSQNEQNVYSVKSLKKYQAGKYEDALIYSIFASFMGY 805


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,178,750
Number of Sequences: 1657284
Number of extensions: 10806498
Number of successful extensions: 22794
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22787
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)