Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0054
(308 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 4e-15
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 38 0.002
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 36 0.007
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.016
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.047
SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.33
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 29 0.58
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 29 1.0
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 28 1.8
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 27 2.4
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 27 2.4
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 27 2.4
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 27 2.4
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 27 2.4
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 27 3.1
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 27 3.1
SB_26305| Best HMM Match : Integrase_Zn (HMM E-Value=9.6) 27 3.1
SB_26213| Best HMM Match : CITED (HMM E-Value=2.5) 27 3.1
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 27 4.1
SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06) 27 4.1
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_51164| Best HMM Match : SOCS_box (HMM E-Value=8e-10) 26 5.4
SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1) 26 5.4
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 26 5.4
SB_59790| Best HMM Match : VWA (HMM E-Value=0) 26 7.2
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3) 26 7.2
SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75) 26 7.2
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 26 7.2
SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_34411| Best HMM Match : TFIIB (HMM E-Value=0.0037) 25 9.5
SB_25947| Best HMM Match : TFIIB (HMM E-Value=0.0018) 25 9.5
SB_12718| Best HMM Match : rve (HMM E-Value=0.0031) 25 9.5
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 25 9.5
SB_38347| Best HMM Match : TFIIB (HMM E-Value=0.0018) 25 9.5
SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018) 25 9.5
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_15372| Best HMM Match : Trefoil (HMM E-Value=0.00046) 25 9.5
>SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1
Query: 22 AFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNIL 165
AFELLRSG DR+ YLLVKEAKIIAMTCTHAALKR +L+++GFK ++
Sbjct: 13 AFELLRSGRDRTNYLLVKEAKIIAMTCTHAALKRHDLVELGFKLPPVI 60
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 151 YDNILMEESPQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 291
+D ++++E+ Q LE +IPLL R R I+ GDHHQLPP
Sbjct: 73 FDLVVIDEAAQALEASCWIPLL---------RAPRCILAGDHHQLPP 110
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 85 IIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIETFIPLLLQNPQDGRSRLKRWIM 264
II TC A +R ++ +++ES LE E +P + P R R+++
Sbjct: 2320 IIICTCAEAGSQR---MRTHANIAQCIVDESNYCLEPEVLVPAVTAGP-----RCSRFVL 2371
Query: 265 IGDHHQLPPV 294
+GDH QL PV
Sbjct: 2372 VGDHKQLVPV 2381
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 34.7 bits (76), Expect = 0.016
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 37 RSGLDRS-KYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIETFIPL 213
+ G++ + K+ +++ KI+ +T T A++ L +G +++EE+ +ILE L
Sbjct: 899 KQGIETNRKFEVLQSKKIVGLTITGASINHDLLQLLGPSV--VIVEEAAEILEPSLLAAL 956
Query: 214 LLQNPQDGRSRLKRWIMIGDHHQLPP 291
PQ L+ I+IGDH QL P
Sbjct: 957 ---TPQ-----LQHLILIGDHKQLRP 974
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 33.1 bits (72), Expect = 0.047
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +1
Query: 67 LVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIETFIPLLLQNPQDGRSR 246
++++A +I MT T AA K E+LQ K I++EE+ ++LE L G
Sbjct: 1440 ILRKAAVIGMTTTGAA-KYREVLQE-IKPRIIIVEEAAEVLEAHIVTAL-----SPGCQH 1492
Query: 247 LKRWIMIGDHHQLPP 291
L I+IGDH QL P
Sbjct: 1493 L---ILIGDHEQLRP 1504
>SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 160 ILMEESPQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVDKN 303
++++E E ET +P+ +R K+ ++IGDH QL P+ K+
Sbjct: 242 VIVDECGMCFEPETLVPITC-------ARAKQVVLIGDHKQLQPIIKD 282
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 29.5 bits (63), Expect = 0.58
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +3
Query: 96 DVHARRPQTFRIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEP--AGRQVPAEALDH-- 263
D H P T R+ N D ++S P D D T AP P G + A ++ H
Sbjct: 183 DFHQSTPDTLRLRTNVLPDHMGVDAFLSSPPPD-DPPTPAPLAPINIGTKRRAPSVKHVK 241
Query: 264 --DRRPPPAAPG 293
+RP P PG
Sbjct: 242 PRRKRPRPPPPG 253
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 0.77
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 177 TSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPP 281
T P D TA P P+ AE L H +RPPP
Sbjct: 19 TDQPSDLCQRTAEPQNPSRT---AEPLSHSKRPPP 50
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 162 TDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPPAAP 290
T G IT++ R AP+ P + A+ H RR P +P
Sbjct: 369 TTGTITADTRHHHRRHPAPSPPTPGTITADTRHHHRRHPAPSP 411
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 162 TDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPPAAP 290
T G T++ R AP+ P + A+ H RR P +P
Sbjct: 347 TPGTTTADTRHHHRRHPAPSPPTTGTITADTRHHHRRHPAPSP 389
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 162 TDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPPAAPG 293
T G IT++ R AP+ + A+ H RR P PG
Sbjct: 391 TPGTITADTRHHHRRHPAPSPLTPGTITADTRHHHRRHPAPTPG 434
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/91 (25%), Positives = 43/91 (47%)
Frame = +1
Query: 34 LRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIETFIPL 213
LR+ D Y V ++A TC + + Q F Y +++E+ QI + PL
Sbjct: 1007 LRAFYDSKSYP-VHFQSVVATTCL--GVNHALFTQRSFDY--CIVDEASQITQPVCLGPL 1061
Query: 214 LLQNPQDGRSRLKRWIMIGDHHQLPPVDKNM 306
+ ++++GDH+QLPP+ +++
Sbjct: 1062 ---------RHARVFVLVGDHYQLPPLVQSL 1083
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 148 KYDNILMEESPQILEIETFIPLLLQNPQDGRS-RLKRWIMIGDHHQLPP 291
KY +L E P+++ +E +L + S + I+IGDH QL P
Sbjct: 4 KYREVLQEIKPRVVIVEEAAEVLEAHIVTALSPACQHLILIGDHKQLRP 52
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 27.5 bits (58), Expect = 2.4
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 60 VPVGQRSENNRDDVHARRP--QTFRIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEPAG 233
V GQRSE RP Q ++I RQ + TS P+D+D A P + +
Sbjct: 109 VSFGQRSEEYATVKIVNRPSRQKAKMICAIDCQRQTSRKTKTSKPQDQDKQAARPRQASR 168
Query: 234 RQVPAEALDHDRRPPPAAP-GRQ 299
+ ++ D D+ P G+Q
Sbjct: 169 KTKTSKPQDQDKSQDQDKPQGKQ 191
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 153 RQHTDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRR 272
RQ + TS P+D+D A P + + + ++ D D++
Sbjct: 276 RQASRKSKTSKPQDQDKQAAKPRQASSKNKTSKPQDQDKQ 315
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 177 TSNPRDRDVHTAAPAEPAGRQVPAEALDHDRR 272
TS P D+D P + +G+ ++ LD D++
Sbjct: 1 TSKPEDQDKQAGRPRQASGKTKTSKPLDQDKQ 32
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 150 IRQHTDGGITSNPRDRDVHTAAPAEPAGRQV-PAEALDHDRRPPPAAPGRQ 299
+RQ TS P+D+D A P + RQ P +A + P +Q
Sbjct: 34 VRQRQKSRKTSKPQDQDKQAARPRQARTRQARPRQATRKTKACKPQDQDKQ 84
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 27.5 bits (58), Expect = 2.4
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +3
Query: 21 GLRTTEVRTGSVQVPVGQRSENNRDDVHARRPQTFRIIANGFQIRQHTDGGITSN--PRD 194
G++ T + G Q P Q+ + + D RPQ + GF +Q PR
Sbjct: 684 GMQQTPSQYG-YQQPQQQQQQQSFDQF---RPQFQQAQYPGFPQQQQPSQSQQQQFFPRQ 739
Query: 195 RDVHTAAPAEPAGRQVPAEALDHD-RRPPPAAPGRQEHG 308
+ + T P + A++L R PPP PG + G
Sbjct: 740 QRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSG 778
>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
Length = 353
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 141 GFQIRQHTDGGITS----NPRDRDVHTAAPAEPAGRQVPAEALDHD-RRPPPAAPGRQE 302
G Q TDG +S NP+D++ + G++ E L +PPP G++E
Sbjct: 52 GEQTAASTDGEKSSQQKENPKDKEQLQKENTKTGGQETSGEQLSSSNEKPPPKTEGQEE 110
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 141 GFQIRQHTDGGITS----NPRDRDVHTAAPAEPAGRQVPAEALDHD-RRPPPAAPGRQE 302
G Q TDG +S NP+D++ + G++ E L +PPP G++E
Sbjct: 330 GEQTAASTDGEKSSQQKENPKDKEQLQKENTKTGGQETSGEQLSSSNEKPPPKTEGQEE 388
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 216 PAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
P EP Q A HD+ PP PGR H
Sbjct: 305 PFEPDRLQHEARIPPHDQGRPPYEPGRPPH 334
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 216 PAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
P EP Q A HD+ PP PGR H
Sbjct: 71 PFEPDRLQHEARIPPHDQGRPPYEPGRPPH 100
>SB_26305| Best HMM Match : Integrase_Zn (HMM E-Value=9.6)
Length = 222
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 195 RDVHTAAPAEPAGRQVPAEALDHDRRPPPAAPGRQE 302
RD A P +P+ + ++ D D+R AA RQE
Sbjct: 82 RDKQCARPRQPSRKTKASKPQDQDKRDKQAARPRQE 117
>SB_26213| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 172
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 159 HTDGGITS-NPRDRDVHTAAPAEPAGRQVPAEALDH 263
H +G + +PR H+ AEPA P E DH
Sbjct: 78 HAEGAAPAPSPRTHAAHSMTAAEPASAPGPGEKGDH 113
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 180 SNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPP 278
++PRD D +P + Q P D D+ PP
Sbjct: 100 TSPRDSDHDQTSPCDSDHDQTPPRDSDRDQTPP 132
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 180 SNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPP 278
++PRD D +P + Q P D D+ PP
Sbjct: 293 TSPRDSDHDQTSPCDSDHDQTPPRDSDRDQTPP 325
>SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06)
Length = 1035
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +1
Query: 157 NILMEESPQILEIETFIPLLLQNPQDGRSRLKRWI 261
++L + ++E+ F + PQ+GR R +W+
Sbjct: 54 SVLRDRQLSVIEVRDFREIGTSIPQNGRQRSTKWV 88
>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 72 QRSENNRDDVHARRPQTFRIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEPAGRQVPAE 251
+ S+ D A RP+ Q +H TS P+DRD A P + + + ++
Sbjct: 67 ETSKPQDQDKQAARPRQASPKTQDKQAARHK----TSKPQDRDKQAARPRQASRKTETSK 122
Query: 252 ALDHDRR 272
D D++
Sbjct: 123 PQDQDKQ 129
>SB_51164| Best HMM Match : SOCS_box (HMM E-Value=8e-10)
Length = 322
Score = 26.2 bits (55), Expect = 5.4
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 16 SEAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEI 195
S A ELLR G D LL KE ++ H+A+K L + +L+E P+I+ I
Sbjct: 80 SAAKELLRIGADIR--LLTKEGTVL-----HSAVKSKWLGKRFTDMLELLLEYWPEIINI 132
Query: 196 ETF 204
+ F
Sbjct: 133 KNF 135
>SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1)
Length = 812
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 36 EVRTGSVQVPVGQRSENNRDDVHARRPQTFRIIANGFQIRQHTDGGITSNPRDRDVHTAA 215
E GS+ S +H +R R+++ RQ+ S RDR + +A
Sbjct: 664 EETRGSIHQQRQYPSAETEGSIHQQRQ---RVVSISRDKRQYPSAETVSISRDRRQYPSA 720
Query: 216 PAEPAGRQVPAEA--LDHDRRPPPAA 287
E + Q EA + DRR P+A
Sbjct: 721 ETEGSIHQQRQEAVSISRDRRQYPSA 746
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 27 RTTEVRTGSVQVPVGQRSENNRDDVHARRPQTFRIIANGFQI 152
RT+E TG ++VP Q +N + V + F + FQ+
Sbjct: 334 RTSEELTGLIRVPTKQHKDNALELVVTTKLLLFEPVRRAFQL 375
>SB_59790| Best HMM Match : VWA (HMM E-Value=0)
Length = 4151
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 33 TEVRTGSVQVPVGQRSENNRDDVHARRP 116
T++ G V +PVG N R H +RP
Sbjct: 1668 TKLCKGGVVIPVGPVLPNRRPTTHPKRP 1695
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 213 APAEPAGRQVPAEALDHDRRPPPAAP 290
AP P R + HD++PPP P
Sbjct: 389 APPIPPRRPIREAVGQHDQKPPPCPP 414
>SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 328
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 7 WKSSEAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQ 138
+K S ++L GLD + + E + TC HA+L + +LQ
Sbjct: 209 FKDSCKRDMLAIGLDVDNWEKLAEGDPLESTCRHASLALAVVLQ 252
>SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)
Length = 1167
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 181 EVIPPSVCC-RI*NPFAIIRNV*GRRACTSSR 89
E +PP++CC + P + + R CTS+R
Sbjct: 1107 ESLPPNICCSHLPQPSCVSTSTAVERYCTSTR 1138
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 93 DDVHARRPQTFRIIANGFQIRQHTDG 170
DD + R +TF I + F ++QH G
Sbjct: 336 DDANERYAKTFSKILDAFDLKQHVKG 361
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 TSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPP-PAAPGRQ 299
TS P+D+D A P + + + ++ D D++ P GR+
Sbjct: 342 TSKPQDKDKQAARPGQASRKTKTSKPQDQDKQAARPRQAGRK 383
>SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 198 DVHTAAPAEPAGRQVPAEALDHDRRPPPAAP 290
D + P A R+ A + DR+P PAAP
Sbjct: 102 DRKSRLPEVTADRKTAAPDITADRKPAPAAP 132
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 PRDRDVHTAAPA-EPAGRQVPAEALDHDRRPPPAAPGR 296
P R+ P+ +PAG + PA+ + + PPAA R
Sbjct: 256 PHTREKIAPVPSSKPAGTKEPAKDEESQQSKPPAAAAR 293
>SB_34411| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 270
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 75 RSENNRDDVHARRPQTFRIIANGFQIRQ 158
RS+N +++ RPQ+F + + IRQ
Sbjct: 210 RSKNRSSELNRARPQSFAVALTYYWIRQ 237
>SB_25947| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 581
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 75 RSENNRDDVHARRPQTFRIIANGFQIRQ 158
RS+N +++ RPQ+F + + IRQ
Sbjct: 516 RSKNRSSELNRARPQSFAVALTYYWIRQ 543
>SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)
Length = 1667
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 159 HTDGGITS-NPRDRDVHTAAPAEPAGRQVPAEALDH 263
H +G + + +PR VH A A A P E DH
Sbjct: 328 HAEGAVPAPSPRMHAVHNMAAAGTASAPGPGEKSDH 363
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 39 VRTGSVQVPVGQRSENNRDDVHAR 110
+ TGSV+ VG SE+NRD + R
Sbjct: 453 LETGSVRDSVGSFSESNRDSMADR 476
>SB_38347| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 631
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 75 RSENNRDDVHARRPQTFRIIANGFQIRQ 158
RS+N +++ RPQ+F + + IRQ
Sbjct: 566 RSKNRSSELNRARPQSFAVALTYYWIRQ 593
>SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 720
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 75 RSENNRDDVHARRPQTFRIIANGFQIRQ 158
RS+N +++ RPQ+F + + IRQ
Sbjct: 473 RSKNRSSELNRARPQSFAVALTYYWIRQ 500
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +3
Query: 204 HTAAPAEPAGRQ-VPAEALDHDRRPPPAAP 290
H P A Q VP H R PPP AP
Sbjct: 488 HPRVPPPGAPHQRVPPPGAPHPRVPPPGAP 517
>SB_15372| Best HMM Match : Trefoil (HMM E-Value=0.00046)
Length = 174
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 143 PICNNSERLRAACVHVIAIIFASLTNRYLDRSSP 42
P C N +++ + V+ IA+I + TN ++ S+P
Sbjct: 89 PRCFNKKKVTGSYVNTIALITPTQTNGTVNTSTP 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,681,265
Number of Sequences: 59808
Number of extensions: 178674
Number of successful extensions: 680
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 389827759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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