Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0054
(308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 169 3e-43
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 31 0.16
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 29 0.50
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 29 0.50
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 29 0.66
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 29 0.87
L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorte... 28 1.5
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 27 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 26 6.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 26 6.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 26 6.2
Z79754-2|CAB02091.1| 578|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 25 8.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 25 8.1
U29382-4|AAG00002.2| 324|Caenorhabditis elegans Hypothetical pr... 25 8.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 25 8.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 25 8.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 25 8.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 8.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 8.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 25 8.1
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 169 bits (412), Expect = 3e-43
Identities = 76/94 (80%), Positives = 90/94 (95%)
Frame = +1
Query: 22 AFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIET 201
AFELLR+G DR++YLLVKEAKIIAMTCTHAAL+R+EL+++GF+YDNI+MEE+ QILE+ET
Sbjct: 1015 AFELLRNGRDRTEYLLVKEAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVET 1074
Query: 202 FIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVDKN 303
FIPLLLQNPQDG +RLKRWIMIGDHHQLPPV +N
Sbjct: 1075 FIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQN 1108
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 31.1 bits (67), Expect = 0.16
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = +1
Query: 19 EAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELLQMGFKYDNILMEESPQILEIE 198
EA E ++ +R +++ II T T + R L ++G + +++EE+ ++LE
Sbjct: 1188 EACENFKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRI--LIVEEAAEVLEAH 1245
Query: 199 TFIPLLLQNPQDGRSRLKRWIMIGDHHQLPP 291
++ S ++ +MIGDH QL P
Sbjct: 1246 IISAMI--------STVEHVVMIGDHKQLRP 1268
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 29.5 bits (63), Expect = 0.50
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 126 RIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPP 281
R IA+ + Q GG S R TAA EPAG+++ A+ H + P P
Sbjct: 1098 RSIASTHSV-QSMRGGFWSGG-GRHTTTAASPEPAGQRIAMAAITHRQSPQP 1147
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 29.5 bits (63), Expect = 0.50
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 126 RIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPP 281
R IA+ + Q GG S R TAA EPAG+++ A+ H + P P
Sbjct: 1098 RSIASTHSV-QSMRGGFWSGG-GRHTTTAASPEPAGQRIAMAAITHRQSPQP 1147
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 29.1 bits (62), Expect = 0.66
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 102 ARHRDYFRFFDQQVLGPIQSGP 37
ARH+D F D+ +LGP+ + P
Sbjct: 634 ARHQDNFALCDRSILGPVTTSP 655
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 0.87
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +3
Query: 63 PVGQRSENNRDDVHARRPQTFRIIANGFQIRQHTDGGITSNPRDRDVH--------TAAP 218
P + +E + DD RR Q + +R+ T G S R R H + AP
Sbjct: 265 PSSEENEEDEDDGAIRRGQRRAV-----PLRRGTTSGPPSRLRGRMSHPMGPPRRSSGAP 319
Query: 219 AEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
A + P E+ PPP++ R+++
Sbjct: 320 PSSASNRRPVESSSRGPPPPPSSSSRRDY 348
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 28.7 bits (61), Expect = 0.87
Identities = 16/59 (27%), Positives = 22/59 (37%)
Frame = +3
Query: 114 PQTFRIIANGFQIRQHTDGGITSNPRDRDVHTAAPAEPAGRQVPAEALDHDRRPPPAAP 290
P++ + A G Q + + + APA P G PA H P P AP
Sbjct: 287 PRSAEMAATGSSDSQPASYEAPAPAATKGYDSPAPAAPKGYDAPAPTAPHPPPPAPVAP 345
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 0.87
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +3
Query: 63 PVGQRSENNRDDVHARRPQTFRIIANGFQIRQHTDGGITSNPRDRDVH--------TAAP 218
P + +E + DD RR Q + +R+ T G S R R H + AP
Sbjct: 265 PSSEENEEDEDDGAIRRGQRRAV-----PLRRGTTSGPPSRLRGRMSHPMGPPRRSSGAP 319
Query: 219 AEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
A + P E+ PPP++ R+++
Sbjct: 320 PSSASNRRPVESSSRGPPPPPSSSSRRDY 348
>L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 19 protein.
Length = 683
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 161 MLSYLKPICNNSERLRAACVHVIAIIFASLT 69
M+ Y+ P+ +N + R A V +AIIFAS+T
Sbjct: 328 MIIYISPLLSNL-KFRPAYVLFLAIIFASIT 357
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 186 PRDRDVHTAAPAEPAGRQVPAEALDHDRR 272
P D + AAPAEPA +P E + D +
Sbjct: 173 PIDLPLQQAAPAEPAPAPLPVEITEEDTK 201
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 305 MFLSTGGSWWWSPIMIQRFSRDLPSCG 225
M S+ S + +M+ FSRDLP+CG
Sbjct: 480 MISSSASSIEEAGLMVDGFSRDLPACG 506
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 204 HTAAPAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
H A+ A G P H +PPPA P +H
Sbjct: 58 HAASIAHTYGGYPPPYPYQHPHQPPPAHPHHLQH 91
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 231 GRQVPA-EALDHDRRPPPAAPGRQ 299
G QVPA + DH+ PPP P R+
Sbjct: 107 GHQVPAPQHGDHEASPPPPPPPRK 130
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical
protein W09D10.2 protein.
Length = 1335
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 118 KRSELLQMGFKYDNILMEESPQILEIETFIPLLLQNPQDG 237
+R L+ GFKY + EESP + T P+++ DG
Sbjct: 552 RRGSSLEDGFKYLADVEEESPASTQAST--PVMITEENDG 589
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 98 VIAIIFASLTNRYLDRSSPDLSSSKAS 18
+I + ++T R LDRSS D SSS S
Sbjct: 423 LIDALLKTMTGRRLDRSSSDSSSSSDS 449
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Frame = +3
Query: 213 APAEPAGRQV-------PAEALDHDRRPPPAAPG 293
APA P GRQ P RPPP APG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG 803
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Frame = +3
Query: 213 APAEPAGRQV-------PAEALDHDRRPPPAAPG 293
APA P GRQ P RPPP APG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG 803
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 253 RWIMIGDHHQLPP 291
R I++GD HQLPP
Sbjct: 243 RMILVGDMHQLPP 255
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Frame = +3
Query: 213 APAEPAGRQV-------PAEALDHDRRPPPAAPG 293
APA P GRQ P RPPP APG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG 803
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Frame = +3
Query: 213 APAEPAGRQV-------PAEALDHDRRPPPAAPG 293
APA P GRQ P RPPP APG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG 803
>Z79754-2|CAB02091.1| 578|Caenorhabditis elegans Hypothetical
protein F25H2.2 protein.
Length = 578
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 160 ILMEESPQILEIETFIPLLLQNPQDGRSRLKRWIMIGD 273
IL + ++ + F LLL+ P+DG S W I D
Sbjct: 437 ILRKRRQTVIMVVRFANLLLKCPEDGNSMEIDWSRIKD 474
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 213 APAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
AP+EP P A + PP APG+ H
Sbjct: 208 APSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 213 APAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
AP+EP P A + PP APG+ H
Sbjct: 208 APSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 198 DVHTAAPAEPAGRQVPAEALDHDRRPPPAAPG 293
D T A +EP P EA D PP PG
Sbjct: 207 DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPG 238
>U29382-4|AAG00002.2| 324|Caenorhabditis elegans Hypothetical
protein R03H10.6 protein.
Length = 324
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 276 VVADHDPTLQPGPAVLRV 223
++ D PT++P PAVL V
Sbjct: 209 IILDEFPTIEPAPAVLTV 226
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 213 APAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
AP+EP P A + PP APG+ H
Sbjct: 208 APSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 213 APAEPAGRQVPAEALDHDRRPPPAAPGRQEH 305
AP+EP P A + PP APG+ H
Sbjct: 208 APSEPITPGAPGPAGPAGPQGPPGAPGQPGH 238
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 180 SNPRDRDV-HTAAPAEPAGRQVPAEALDHDRR---PPPAAP 290
S P DV AAP+EP VP EA + P AAP
Sbjct: 3574 SEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAP 3614
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 180 SNPRDRDV-HTAAPAEPAGRQVPAEALDHDRR---PPPAAP 290
S P DV AAP+EP VP EA + P AAP
Sbjct: 3574 SEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAP 3614
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 180 SNPRDRDV-HTAAPAEPAGRQVPAEALDHDRR---PPPAAP 290
S P DV AAP+EP VP EA + P AAP
Sbjct: 3574 SEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAP 3614
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 198 DVHTAAPAEPAGRQVPAEALDHDRRPPPAAPG 293
D T A +EP P EA D PP PG
Sbjct: 207 DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPG 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,075,905
Number of Sequences: 27780
Number of extensions: 137146
Number of successful extensions: 492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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