Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0054
         (308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   0.36 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   0.64 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   1.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   2.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   7.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 0.36
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 139 MGFKYDNILMEESPQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVD 297
           + FK+ +IL   +  I E+ T  P+L + P D   R +  I++ D  +L  VD
Sbjct: 254 IAFKFHSIL-NRTNNIFELVTVEPILTERPSD---RQRNEILLSD--ELDSVD 300


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 161 MLSYLKPICNNSERLRAACVHVIAIIFASLTNRYLDRSSP 42
           ++S+L+P  N    L    VHV+A++        LDR SP
Sbjct: 557 LVSFLQPFSNTLWILVMVSVHVVALVL-----YLLDRFSP 591


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 119 NVPNYCKWVSNTT 157
           N P+YC W  N T
Sbjct: 7   NRPSYCTWELNAT 19


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 150 IRQHTDGGITSNPRDRDV 203
           I+ H+D  +  +PRD  +
Sbjct: 279 IKTHSDSSVVGSPRDSPI 296


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 261 DPTLQPGPAV 232
           + TLQPGPAV
Sbjct: 430 EQTLQPGPAV 439


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 261 DPTLQPGPAV 232
           + TLQPGPAV
Sbjct: 430 EQTLQPGPAV 439


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 210 AAPAEPAGRQVPA 248
           A P EPAG ++P+
Sbjct: 100 AGPDEPAGAEIPS 112



 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 299 LSTGGSWWW 273
           LSTGGS +W
Sbjct: 136 LSTGGSCYW 144


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 153  RQHTDGGITSNPRDRDVHTAAPAEPAGRQ 239
            R+  +GG     RDR   T+AP +P  +Q
Sbjct: 1427 REVHNGG-QQEDRDRKTLTSAPQQPQQQQ 1454


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 306 HVLVDRGQLVVVADHDPTLQ 247
           H  +DR  + VVA ++ TLQ
Sbjct: 331 HQSLDRQNIDVVARNEDTLQ 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,689
Number of Sequences: 438
Number of extensions: 1856
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)