Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0053
(680 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 173 9e-44
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 169 1e-42
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 167 4e-42
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 163 1e-40
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 158 3e-39
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 140 6e-34
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 140 1e-33
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 139 1e-33
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 139 1e-33
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 138 2e-33
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 132 2e-31
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 132 2e-31
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 132 2e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 132 3e-31
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 130 8e-31
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 103 8e-23
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 97 9e-21
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 95 4e-20
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 86 2e-17
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 84 7e-17
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 1e-14
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 65 5e-11
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 64 6e-11
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 47 1e-05
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 39 0.004
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 29 2.8
At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative (CH... 29 2.8
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 29 2.8
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 29 2.8
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 27 8.7
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 27 8.7
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 27 8.7
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 173 bits (421), Expect = 9e-44
Identities = 94/172 (54%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
Frame = +3
Query: 183 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 362
+ + L++ +L + LG L I + KS E K ++THKV FD++I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 363 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 521
VPKT ENF L +G G YKGS FHR+I +FM+Q SIYGE
Sbjct: 60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGE 119
Query: 522 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVL 677
+F DENFKLKH G G+LSMANAG+DTNGSQFFITT T WLDGRHVVFGKV+
Sbjct: 120 KFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVV 171
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 169 bits (411), Expect = 1e-42
Identities = 89/154 (57%), Positives = 105/154 (68%), Gaps = 7/154 (4%)
Frame = +3
Query: 240 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 419
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 420 -------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSM 578
YKGSKFHR+I +FMIQ SIYG++F DENFKLKH G G LSM
Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSM 135
Query: 579 ANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
AN+G+DTNGSQFFITT T WLDGRHVVFGKV++
Sbjct: 136 ANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQ 169
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 167 bits (407), Expect = 4e-42
Identities = 83/147 (56%), Positives = 101/147 (68%)
Frame = +3
Query: 240 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 419
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 420 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 599
YKGS FHR+IK+FMIQ SIYG +FEDENF LKH G G LSMANAG +T
Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198
Query: 600 NGSQFFITTGKTPWLDGRHVVFGKVLE 680
NGSQFFI T KT WLD +HVVFG+V+E
Sbjct: 199 NGSQFFICTVKTSWLDNKHVVFGQVIE 225
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 163 bits (395), Expect = 1e-40
Identities = 80/137 (58%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
Frame = +3
Query: 279 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 449
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
++FMIQ +S+YG F+DENFKL H G G LSMANAG +TNGSQFFI T
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDGRHVVFG+V+E
Sbjct: 207 KTSWLDGRHVVFGQVIE 223
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 158 bits (384), Expect = 3e-39
Identities = 83/154 (53%), Positives = 99/154 (64%), Gaps = 8/154 (5%)
Frame = +3
Query: 240 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 416
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 417 G-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 575
G +KGS FHR+I FMIQ SIYG++F DENFKLKH G G+LS
Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLS 161
Query: 576 MANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVL 677
MAN+G D+NGSQFFITT T WLDG HVVFGKVL
Sbjct: 162 MANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVL 195
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 140 bits (340), Expect = 6e-34
Identities = 75/137 (54%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI T
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDG+HVVFG+V+E
Sbjct: 126 KTDWLDGKHVVFGQVVE 142
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 140 bits (338), Expect = 1e-33
Identities = 74/137 (54%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI T
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDG+HVVFG+V+E
Sbjct: 125 KTDWLDGKHVVFGQVVE 141
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 139 bits (337), Expect = 1e-33
Identities = 72/137 (52%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
FM Q SIYG +FEDENFKLKH G G LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDG+HVVFGKV++
Sbjct: 125 KTSWLDGKHVVFGKVVD 141
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 139 bits (337), Expect = 1e-33
Identities = 73/137 (53%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
FM Q SIYG +F+DENF KH G G LSMANAG +TNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDG+HVVFG+V+E
Sbjct: 126 KTSWLDGKHVVFGQVVE 142
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 138 bits (335), Expect = 2e-33
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Frame = +3
Query: 186 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 362
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 363 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 521
VPKT ENF L +G+ YKG+ FHR+I F+IQ SIYG
Sbjct: 72 VPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGG 131
Query: 522 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
F DENFK++H AG ++MAN G D+NGSQFFITT K WL+G HVV GKV++
Sbjct: 132 TFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQ 184
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 132 bits (319), Expect = 2e-31
Identities = 70/137 (51%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTG 629
FM Q SIYG +F+DENF KH GAG LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 630 KTPWLDGRHVVFGKVLE 680
KT WLDG+HVVFG+V++
Sbjct: 125 KTSWLDGKHVVFGQVVK 141
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 132 bits (319), Expect = 2e-31
Identities = 73/142 (51%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Frame = +3
Query: 279 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 434
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 435 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 614
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 615 FITTGKTPWLDGRHVVFGKVLE 680
FI + P LDG+HVVFGKV+E
Sbjct: 124 FILFKRQPHLDGKHVVFGKVVE 145
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 132 bits (319), Expect = 2e-31
Identities = 73/142 (51%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Frame = +3
Query: 279 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 434
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 435 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 614
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 615 FITTGKTPWLDGRHVVFGKVLE 680
FI + P LDG+HVVFGKV+E
Sbjct: 124 FILFKRQPHLDGKHVVFGKVVE 145
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 132 bits (318), Expect = 3e-31
Identities = 71/136 (52%), Positives = 85/136 (62%), Gaps = 8/136 (5%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 446
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 447 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 626
IK FMIQ SIYG +F+DENF+LKH G LSMAN+G +TNGSQFFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 627 GKTPWLDGRHVVFGKV 674
+T LDG+HVVFG+V
Sbjct: 125 TRTSHLDGKHVVFGRV 140
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 130 bits (314), Expect = 8e-31
Identities = 71/142 (50%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Frame = +3
Query: 267 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGS 431
P PK V FD+ IG G I + LF PKT ENF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 432 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQ 611
+FHRVIK+FM+Q SIYG +FEDENF KH G G LSMAN+G +TNG Q
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQ 144
Query: 612 FFITTGKTPWLDGRHVVFGKVL 677
FFIT K WLD +HVVFG+VL
Sbjct: 145 FFITCAKCDWLDNKHVVFGRVL 166
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 103 bits (248), Expect = 8e-23
Identities = 53/120 (44%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +3
Query: 318 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 497
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 498 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKV 674
SIYG +FEDE N +LKH GAG LSMANAG +TNGSQFFIT P LDG+H +FG+V
Sbjct: 72 G-ESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRV 130
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 97.1 bits (231), Expect = 9e-21
Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +3
Query: 327 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 506
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539
Query: 507 SIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
SI+G FEDE K L+H LSMANAG +TNGSQFFITT TPWLD +H VFG+V++
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVK 598
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 95.1 bits (226), Expect = 4e-20
Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +3
Query: 324 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 503
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPKGTGKGGT 64
Query: 504 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVL 677
SI+G++F DE LKH G LSMAN+G +TNGSQFFIT K P L+G + +FGKV+
Sbjct: 65 -SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVI 122
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 85.8 bits (203), Expect = 2e-17
Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Frame = +3
Query: 279 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 434
K +V D+ I D T+V LF + PKT+ENF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 435 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 614
FHR++K Q SIY +F DE+ KL+H G LSM+ A +D GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 615 FITTGKTPWLDGRHVVFGKVLE 680
IT LD +VVFGK+++
Sbjct: 124 HITFRPNQQLDRNNVVFGKLIQ 145
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 84.2 bits (199), Expect = 7e-17
Identities = 56/140 (40%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +3
Query: 261 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 440
++ K PK V F GD NI L P+ ENF L ++ Y G FH
Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386
Query: 441 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFF 617
R I+NFMIQ SI+G+ F+DE N KL H G G +SMAN+G TNGSQFF
Sbjct: 387 RSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFF 445
Query: 618 ITTGKTPWLDGRHVVFGKVL 677
+ L+ +H VFG V+
Sbjct: 446 VLYKSATHLNYKHTVFGGVV 465
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 76.6 bits (180), Expect = 1e-14
Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = +3
Query: 330 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 506
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 507 SIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTGKTPWLDGRHVVFGKV 674
SIYG F DE + +L+ G ++MANA ++NGSQFF T K WLD +H +FGKV
Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 64.9 bits (151), Expect = 5e-11
Identities = 52/139 (37%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Frame = +3
Query: 291 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 449
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 450 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHY-GAGWLSMANAGKDTNGSQFFI-T 623
+ M I+ E +DE F L H G G +SMA D+NGSQF I
Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHM 116
Query: 624 TGKTPWLDGRHVVFGKVLE 680
+DG HVV GKV+E
Sbjct: 117 KDYGLQVDGDHVVIGKVVE 135
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 64.5 bits (150), Expect = 6e-11
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Frame = +3
Query: 324 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 503
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 504 ---RSIYGER---FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT-TGKTPWLDGRHV 659
+ +YGE+ ++DE + LKH G ++MA+ G++ N SQF+ T +LDG+H
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHT 124
Query: 660 VFGKVLE 680
VFG++ E
Sbjct: 125 VFGQIAE 131
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 46.8 bits (106), Expect = 1e-05
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Frame = +3
Query: 198 IMGTLTMALGILLFIASAKSDEIPKGPKV-THKVSFDMKIGDDNIGTIVIGLFGKTVPKT 374
I L + L L F++ AK+ +P P++ + +V F GD I G + PKT
Sbjct: 3 ITRNLILGLACLAFVSIAKA--LPHEPELGSARVVFQTSYGD-----IEFGFYPTVAPKT 55
Query: 375 TENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX----RSIYGERFEDENF 542
++ F+L + GY + F RV K F+ Q R ++ E
Sbjct: 56 VDHIFKLVRLG---GYNTNHFFRVDKGFVAQVADVASGRSAPMNEEQRKEAEKKIVGEFS 112
Query: 543 KLKHYGAGWLSMANAGKDTNGSQ--FFITTGKTPWLDGRHVVFGKV 674
+KH G LSM D N +Q F + G P LD ++ VFGKV
Sbjct: 113 DVKHV-RGTLSMGRYD-DPNSAQSSFSMLLGNAPHLDRQYAVFGKV 156
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/117 (28%), Positives = 54/117 (46%)
Frame = +3
Query: 330 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 509
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 510 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
G+ + KH + N G + + + ITT P L+ + +VFG+VL+
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLK 202
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/117 (28%), Positives = 54/117 (46%)
Frame = +3
Query: 330 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 509
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 510 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
G+ + KH + N G + + + ITT P L+ + +VFG+VL+
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLK 202
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/117 (28%), Positives = 54/117 (46%)
Frame = +3
Query: 330 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 509
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 510 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKVLE 680
G+ + KH + N G + + + ITT P L+ + +VFG+VL+
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLK 202
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 318 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXX 494
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQAGDSAEFDA 138
Query: 495 XXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTGKTPWLDGRHVVFGKV 674
++ + D + K + + G A + G +FFI + + L+ + VFG+V
Sbjct: 139 VKDWALDRKNI-DTSLKHEEFMVG---TPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRV 194
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Frame = +3
Query: 180 RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH--------KVSFDMKIGDDNIGT 335
++ L+L++ T T L LL + A++D I P +T+ K D+ I + IG
Sbjct: 50 KSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTKKAFIDVSIDGEPIGR 107
Query: 336 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 461
I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 108 IIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 600 NGSQFFITTGKTPWLDGRHVVFGKVLE 680
NG++F IT +P L+ +V GKVLE
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLE 256
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Frame = +3
Query: 327 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 506
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKIFPGQYFLAGRQGGGRRDTAE 143
Query: 507 SIYGERFEDEN--------FKLKHYGAGWLSMANAGKDTNGS----------QFFITTGK 632
Y R N F L H AG +S+ + D + +F ITTG
Sbjct: 144 VGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLITTGP 203
Query: 633 --TPWLDGRHVVFGKVLE 680
+P LDG ++VFG VLE
Sbjct: 204 GPSPQLDGGNIVFGTVLE 221
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 507 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTGKTP 638
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
>At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative
(CHX25) similar to Na+/H+-exchanging protein slr1595,
Synechocystis sp., PIR:S74951; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 857
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -2
Query: 370 LGTVFPNNP-ITIVPILSSPIFMSKLTL*VTLGPLGISSDLALAMNNKIPKAIVRVPMIK 194
LG V P+ P + + S F+++ + + +G +++ L PK I P+I
Sbjct: 329 LGLVVPHGPPLGSTLAIRSETFVNEFLMPFSFALVGQKTNVNLISKETWPKQIS--PLIY 386
Query: 193 TSLVRFLAIFTKFVSNVYFFKI 128
S+V F+ F FFK+
Sbjct: 387 MSIVGFVTKFVSSTGAALFFKV 408
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 198 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 377
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 378 ENFFQ---LAQKPEGEGYKGS 431
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 198 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 377
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 378 ENFFQ---LAQKPEGEGYKGS 431
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 434
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 435 FHRV 446
F R+
Sbjct: 429 FPRI 432
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 434
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 435 FHRV 446
F R+
Sbjct: 429 FPRI 432
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 434
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 435 FHRV 446
F R+
Sbjct: 429 FPRI 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,200,021
Number of Sequences: 28952
Number of extensions: 282927
Number of successful extensions: 629
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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