Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0052
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 94  INVKTIVITVLFL*SYHDF-LHCHNGTYRSLCVYVCFKTL 210
           I  +   + +L++  + +F LHC+N T+R L  ++   TL
Sbjct: 134 ITCELFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTL 173


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +2

Query: 263 WRHCFNRFRFYNKW 304
           +R+C+  +  YN+W
Sbjct: 256 YRYCYRPYPVYNQW 269


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 175 RSLCVYVCFKTLFLQFQWSTP 237
           RS   YVC  T+FL F    P
Sbjct: 150 RSFTYYVCNTTIFLIFHSVLP 170


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 661 SNSFLILNRNLIFVFKTLTFYFINLINY 578
           +N F I     + +  T+T YFI +I +
Sbjct: 326 ANFFDISRSTFLGILATITTYFIVIIEF 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,787
Number of Sequences: 336
Number of extensions: 2602
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)