Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0052
         (664 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.8  
SB_37420| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.8  

>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 357 FFNGFFLLT*QRLLRYECVKVLSDI*KCTIFNIVLIKIEAFYIHPIGTII 506
           F   FF L    LL Y  +KV + + +  +FNI+   +  F   P+G I+
Sbjct: 629 FAQAFFTLLSSFLLAYGSIKVSTSLHERLLFNILRSPMSFFESTPVGRIV 678


>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 293 KIEID*SSDAIAFRYVICAGVDH*NCKNKVL 201
           K+ ID +SDA    +VI  G DH NC+ K++
Sbjct: 461 KVRIDLNSDA----FVIMGGEDHINCRLKIV 487


>SB_37420| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 346

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 293 KIEID*SSDAIAFRYVICAGVDH*NCKNKVL 201
           K+ ID +SDA    +VI  G DH NC+ K++
Sbjct: 105 KVRIDLNSDA----FVIMGGEDHINCRLKIV 131


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,379,483
Number of Sequences: 59808
Number of extensions: 263256
Number of successful extensions: 443
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)