Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0049
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9NZQ8 Cluster: MTR1; n=31; Euteleostomi|Rep: MTR1 - Ho...    34   4.1  
UniRef50_Q4J6L6 Cluster: Conserved membrane protein; n=1; Sulfol...    33   7.2  
UniRef50_Q617K0 Cluster: Putative uncharacterized protein CBG149...    33   9.5  

>UniRef50_Q9NZQ8 Cluster: MTR1; n=31; Euteleostomi|Rep: MTR1 - Homo
            sapiens (Human)
          Length = 1165

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +2

Query: 116  SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 280
            S PS++A W  + +L+ F L   V +   L++ F Y F  +       WKFQ Y+    Y
Sbjct: 945  SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004

Query: 281  HKIKILSPRF 310
            H+   L+P F
Sbjct: 1005 HERPALAPPF 1014


>UniRef50_Q4J6L6 Cluster: Conserved membrane protein; n=1;
           Sulfolobus acidocaldarius|Rep: Conserved membrane
           protein - Sulfolobus acidocaldarius
          Length = 316

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = +3

Query: 156 FYDLISRLLFPFDYYLHSNISLFQLLVVIRGNFKIILTTVVIIKLKYSVRDFNSF 320
           ++ +ISRL FP   YL ++++   LL +    F+ + + V+II   +S+ D   +
Sbjct: 54  YFGMISRLFFPARNYLATHLTSLFLLAIPYYPFQALASLVLIITELWSISDIRGY 108


>UniRef50_Q617K0 Cluster: Putative uncharacterized protein CBG14935;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG14935 - Caenorhabditis
           briggsae
          Length = 663

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +2

Query: 338 INSDEFQFCSASIASIKRYYFKGAKQLIQKNVHFNLLSIRRGTDNLNDY 484
           ++ ++F+F    + +I +Y+    +    +N+ FN++SI+  TD L DY
Sbjct: 284 VDMNQFRFVYNGLKNIAKYHGFTGQTYFNENIKFNMVSIQDFTDVLLDY 332


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,859,628
Number of Sequences: 1657284
Number of extensions: 9823145
Number of successful extensions: 22638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22532
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)