Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0048
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 306 LDKEVDVQPNPCISTLSFSPDL 241
           +D  +DV PN C +T ++  DL
Sbjct: 173 VDLVIDVDPNNCDNTYAYISDL 194


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 10  CVRAIKQRIPFLFYV*KITGGPKAFPVSPGQVGE 111
           C R    RIP L Y   + GG  A  V  G++ E
Sbjct: 56  CQRVHSSRIPDLSYDFIVVGGGAARAVVAGRLSE 89


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 137 SHPSWLSLCSPTCPGETGKAF 75
           SH +W+   S T PG     F
Sbjct: 544 SHGNWIYPASMTIPGSNSAVF 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,135
Number of Sequences: 438
Number of extensions: 2989
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)