Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0044
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1230 + 25419533-25420446,25421098-25421279,25422197-254225...    31   0.80 
11_01_0327 - 2446949-2446999,2447060-2447299,2447542-2447813,244...    31   1.1  
09_04_0587 + 18782870-18783828,18784084-18784265,18785283-187856...    29   4.3  
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117...    29   4.3  
01_06_0440 + 29401405-29401407,29401721-29401920,29402406-294024...    29   5.6  
04_01_0550 - 7115728-7116065,7116793-7117843                           28   9.8  
02_04_0121 - 19943988-19944251,19944534-19944734,19944802-199451...    28   9.8  

>08_02_1230 +
           25419533-25420446,25421098-25421279,25422197-25422543,
           25423327-25423557,25423680-25423775,25423934-25424044
          Length = 626

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +2

Query: 485 KWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESK 655
           +WR+K +++T    +  +E   I   +A+LIY    +   GIAF   I ++SD E +
Sbjct: 47  RWREKIRSSTPLHVVGLAEMLAIFGLVASLIYLLSFF---GIAFVQSIVSSSDDEEE 100


>11_01_0327 -
           2446949-2446999,2447060-2447299,2447542-2447813,
           2447917-2447956,2448057-2448134,2448212-2448271,
           2448434-2448493,2449620-2449766,2449921-2450018,
           2450455-2450582,2451275-2451321
          Length = 406

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 644 QESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVD 766
           + SK    Q+E  +++  S G L+  P GN + G A  DVD
Sbjct: 187 ESSKLKLAQMEQDIHRARSQGLLLGAPGGNTSSGAAMFDVD 227


>09_04_0587 +
           18782870-18783828,18784084-18784265,18785283-18785629,
           18786497-18786739
          Length = 576

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 485 KWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESK 655
           +WR+K + +T    +  +E   I   +A+LIY    +   GIAF   + + SD E +
Sbjct: 65  RWREKIRTSTPLHVVGLAEILAICGLVASLIYLLSFF---GIAFVQSVVSNSDDEEE 118


>01_06_0789 -
           32010131-32010330,32010438-32010866,32011658-32011752,
           32011836-32011933,32012586-32012942,32013615-32013792,
           32013856-32013936,32014441-32014548,32014916-32015178
          Length = 602

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 649 FLIRSSFYKVIKGNSIF*ITLILVDKCCYSRCYNSAFTC--CNCS 521
           FL+R      +    I  ++L+ +  C Y  C+ S   C  CNCS
Sbjct: 124 FLMRFCSISTVDSKRIPLLSLVPLSLCLYCECFASGVYCDGCNCS 168


>01_06_0440 +
           29401405-29401407,29401721-29401920,29402406-29402490,
           29403038-29403121,29403853-29404147,29404228-29404322,
           29406118-29406858
          Length = 500

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +2

Query: 281 KYKNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTK---ADLKRCLKEKSIYKVD 451
           KY + ++ A+  +    +  D + IC ++ + ++VQ    +   A L+R +  K I K+D
Sbjct: 68  KYSSMVIEALCEI-GDPNGSDVDAICHYIEQRHEVQANFRRLLTAKLRRLIAAKKIEKID 126

Query: 452 YKDNVSYRNAAKWRKKSKN 508
               ++   AAK  + +K+
Sbjct: 127 RSYRITESYAAKVSQANKS 145


>04_01_0550 - 7115728-7116065,7116793-7117843
          Length = 462

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 395 DTKADLKRCLKEKSIYKV-DYKDNVSY-RNAAKWRKKSK 505
           D K  + +   E SI KV D K  V Y RNAAKW +K+K
Sbjct: 401 DEKGSVTKEEVEISIKKVMDGKRAVEYKRNAAKWMQKAK 439


>02_04_0121 -
           19943988-19944251,19944534-19944734,19944802-19945124,
           19945283-19945316,19945479-19945856,19946425-19946678,
           19946791-19946938,19947052-19947198,19947287-19947664
          Length = 708

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +2

Query: 593 YLENGIAFDDLIKAASDQESKYSKKQLENIVNKEL 697
           +++NG  +D  ++  +D++ K  KK+++ I+ K L
Sbjct: 149 WIDNGFYYDFDMEPLTDKDLKRIKKEMDRIIRKNL 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,992,825
Number of Sequences: 37544
Number of extensions: 307826
Number of successful extensions: 699
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)