Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0044
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 30 2.2
Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 29 2.9
Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical p... 29 5.1
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 28 6.7
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 6.7
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 28 6.7
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 764 LHHGLLVPKLNYHLVISLNYQSLILCLQYSPIVFWS--TLIPDQKQ 633
+ HG PK YH ++S Y + L L + + F S TL+ D+K+
Sbjct: 407 IRHGSTYPKDQYHSLVSATYCCVALLLLSAGLYFVSSLTLVSDRKK 452
>Z68004-2|CAA91982.1| 677|Caenorhabditis elegans Hypothetical
protein F47B10.2 protein.
Length = 677
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 620 DLIKAASDQESKYSKKQLENIVNKELSSGSLVKLPNGNLALG 745
D + A + ++ S+++LE +VNKELS P+G L G
Sbjct: 470 DFLAIAVAELAQMSERRLERLVNKELSGLPTFLTPDGGLNSG 511
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 353 ICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKDNVSYRNAAKWRKKSKNNTMSAAIA 532
+ K L + + K+D+ RC S + V N+ +AK + KNN +++ IA
Sbjct: 2168 LTKMKLTLSEADSSNKKSDILRCTLNSSSFNVH--TNLKTLTSAKESNRPKNNLINSNIA 2225
Query: 533 TS 538
T+
Sbjct: 2226 TT 2227
>Z92834-11|CAB07388.2| 594|Caenorhabditis elegans Hypothetical
protein F39B2.8 protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 383 VQPKDTKADLKRCLKEKSIYKVD--YKDN---VSYRNAAKWRKKSKNNTMSAAI 529
+ P+D +A+LKR + +YK+ Y+DN R KW K+ T +I
Sbjct: 493 MNPEDIRAELKRVYTQLRMYKLKNLYQDNPHISKKRGGKKWSDKNTKATRRISI 546
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +2
Query: 446 VDYKDNVSYRNAAKWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDL 625
VD S+RN+ W+K K + S S II S+ + +Q +G D +
Sbjct: 277 VDRPSTQSFRNSKMWKKVKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQ----DGYVEDSV 332
Query: 626 IKAASDQESKYSKKQLENIVNKELSS 703
S + SK K L N K SS
Sbjct: 333 TPCTSSRNSK-RKSWLRNCTGKSNSS 357
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 792 LSNLKLSELSTSWSAGPKAKLPFGNFTKLPELNSLFTIFS 673
L+ L +E STS S+G + FG ++ PE ++ FT S
Sbjct: 408 LTTLSTNEQSTSTSSGGHSTSTFGTTSETPETSTDFTATS 447
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +2
Query: 446 VDYKDNVSYRNAAKWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDL 625
VD S+RN+ W+K K + S S II S+ + +Q +G D +
Sbjct: 277 VDRPSTQSFRNSKMWKKVKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQ----DGYVEDSV 332
Query: 626 IKAASDQESKYSKKQLENIVNKELSS 703
S + SK K L N K SS
Sbjct: 333 TPCTSSRNSK-RKSWLRNCTGKSNSS 357
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +2
Query: 446 VDYKDNVSYRNAAKWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDL 625
VD S+RN+ W+K K + S S II S+ + +Q +G D +
Sbjct: 277 VDRPSTQSFRNSKMWKKVKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQ----DGYVEDSV 332
Query: 626 IKAASDQESKYSKKQLENIVNKELSS 703
S + SK K L N K SS
Sbjct: 333 TPCTSSRNSK-RKSWLRNCTGKSNSS 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,921
Number of Sequences: 27780
Number of extensions: 321973
Number of successful extensions: 962
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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