Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0043
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC199172-2|ABO33275.1|  305|Caenorhabditis elegans F-box a prote...    29   4.2  
U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine rec...    28   5.6  
U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U00052-5|AAK21423.1|  289|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AC199172-2|ABO33275.1|  305|Caenorhabditis elegans F-box a protein
           protein 32 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 681 SSIRCLDDCI*-FFFRQCLIFLVMSNLKEALLAIIF 577
           S+I+  DD +    F++C IF+V +NLK   LA IF
Sbjct: 228 SAIKVRDDLLTRSTFQECTIFIVKANLKPVELAQIF 263


>U41009-10|AAA82284.2|  313|Caenorhabditis elegans Serpentine
           receptor, class v protein17 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = -2

Query: 331 TLPYKNFVQLLSAWCKGLIDWG**VDLFDTVSIHVRD*M*QNLPTCELNVDM*VLRHK*E 152
           TLP   F QLL  W    I WG  V +F+++ +   +    +     L +D  ++  K  
Sbjct: 116 TLPLTRFTQLLKPWKIAYIYWG-PVAIFNSIFLSSLEIGFDSPERMILVMDPDII-SKTT 173

Query: 151 RVLLYFPM*SSLVTITLY-IIVTYMK 77
           ++  +F + S +  +TLY +IV +++
Sbjct: 174 KITFFFVVASCVTCLTLYGLIVKFIR 199


>U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical
           protein B0478.3 protein.
          Length = 151

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 159 LCLSTYMSTFNSQVGK-FCYIQSRTCMDTVSNKS 257
           +C  T+ + +N+Q+GK FC  +   C+ T + K+
Sbjct: 83  VCCETHDNCYNTQIGKDFCDNEFCLCLSTATEKN 116


>Z79603-8|CAH04750.1|  137|Caenorhabditis elegans Hypothetical
           protein M163.8 protein.
          Length = 137

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = +3

Query: 72  ICFI*VTMIYNVIVTRLDYIGKYSKTRSY-LCLSTYMSTFNSQVGKFCYIQSRTCMDTVS 248
           +C + V +I++ +   +D     +   S   C S++ S  ++Q  ++C    R C    S
Sbjct: 6   LCVLAVLIIFSTVEMCMDVNPNCANWVSNGFCTSSFYS--DAQKTEYCPASCRLCSGASS 63

Query: 249 NKSTYQPQSISPLHQADSNCTKF 317
             S+    S S    ++SNC  +
Sbjct: 64  TTSSSASSSSSTCGDSNSNCASW 86


>U00052-5|AAK21423.1|  289|Caenorhabditis elegans Hypothetical
           protein K02F3.8 protein.
          Length = 289

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 123 DYIGKYSKTRSYLCLSTYMSTFNSQVGKFCYIQSRTCM---DTVSNKSTYQPQSISP 284
           DY  KYS   S  CL+  +++    +  FC    + C        +KST + + + P
Sbjct: 89  DYCTKYSNNFSTYCLTGKLASLEGLLATFCSTYMKNCNIKGIVKEDKSTAKTEKVFP 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,836,223
Number of Sequences: 27780
Number of extensions: 259417
Number of successful extensions: 562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)