Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0039
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.34 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.5  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   5.5  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    23   9.7  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    23   9.7  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    23   9.7  
AY331406-1|AAQ97587.1|   96|Anopheles gambiae agCP14332 protein.       23   9.7  
AY331405-1|AAQ97586.1|   96|Anopheles gambiae agCP14332 protein.       23   9.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.7  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.7  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 373 NVGGRVRKISESRSEGPALSPRSAGLSPH-RSAPAMR 480
           N    +RKI  SR      SPRS G  P  RS PA R
Sbjct: 242 NAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARR 278


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 339 TGPLRVVYVPIVLHYWHHERHLGEGGGD 256
           +G L +   P + H+ HH  H   GGG+
Sbjct: 110 SGALHLGQNPNLHHHHHHHHHGNNGGGN 137


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 303 LHYWHHERHLGEGGGDS 253
           LH+ HH  H    GG+S
Sbjct: 159 LHHHHHHHHNAPAGGES 175


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 303  LHYWHHERHLGEG 265
            LH+ HH  H GEG
Sbjct: 1318 LHHGHHHHHGGEG 1330


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 556 PNPCWGCLAPHAARLASEARDSTTTSASPERCGE-D*ALPIVVTT 425
           P+P     +PH A LA  +  S +T  SP        + PIV T+
Sbjct: 717 PSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPIVATS 761


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 335 PVEPQNRRRRRGSTWEAGCGKYRSHGPKARRCHHDRQG 448
           PV+ Q  +RR    WE G       GP    C   +QG
Sbjct: 408 PVKIQIPKRRCFKCWETGHFSRDCKGPDRTDCDAVKQG 445


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 213 RNKICSRKLTLRSIMILIFFFTECLYFRKI 124
           RN+  +    LR + + ++  T+ LYF+ +
Sbjct: 8   RNRYIAYGWALRIVFLHLYALTQALYFKDV 37


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 213 RNKICSRKLTLRSIMILIFFFTECLYFRKI 124
           RN+  +    LR + + ++  T+ LYF+ +
Sbjct: 8   RNRYIAYGWALRIVFLHLYALTQALYFKDV 37


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 213 RNKICSRKLTLRSIMILIFFFTECLYFRKI 124
           RN+  +    LR + + ++  T+ LYF+ +
Sbjct: 8   RNRYIAYGWALRIVFLHLYALTQALYFKDV 37


>AY331406-1|AAQ97587.1|   96|Anopheles gambiae agCP14332 protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 397 ISESRSEGPALSPRSAGLSPHRSAPAMRSLSYCRAPHSR 513
           +     EGP +   +A L+P       R  S C +P SR
Sbjct: 33  VGNRMKEGPNVENGAANLTPGNVRRRTRCGSLCGSPVSR 71


>AY331405-1|AAQ97586.1|   96|Anopheles gambiae agCP14332 protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 397 ISESRSEGPALSPRSAGLSPHRSAPAMRSLSYCRAPHSR 513
           +     EGP +   +A L+P       R  S C +P SR
Sbjct: 33  VGNRMKEGPNVENGAANLTPGNVRRRTRCGSLCGSPVSR 71


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 389 CGKYRSHGPKARRCHH 436
           C + R  GPK R C H
Sbjct: 188 CSQGRCFGPKPRECCH 203


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 571 LPADYPNPCWGCLAPH 524
           +P +   PC GC+AP+
Sbjct: 229 VPKNLREPCPGCVAPY 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,270
Number of Sequences: 2352
Number of extensions: 9795
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)