Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0039
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 29 3.2
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 29 3.2
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 29 3.2
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical ... 27 7.5
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 27 9.9
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 27 9.9
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GED + VV G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2210 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2240
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2399 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2429
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2526 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2653 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2683
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 511 ASEARDSTTTSASPERCGED*ALPIVVTTPG 419
A+EA + TTTSA E GE+ + VV + G
Sbjct: 2779 ATEASEETTTSAVTEGSGEETTVVAVVESSG 2809
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 332 GPVEPQNRRRRRGSTWEAGCGKYRSHGPK 418
GP P RR R+G+ ++ G + S GPK
Sbjct: 165 GPSGPPGRRGRKGADGKSAMGGFGSPGPK 193
>AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical
protein Y37B11A.3 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 207 CFVSTEAISLKTFQQKSHRHLRRDGVHDASSEERLGHI 320
CFVST A S K + Q +DG+H+ S R+ HI
Sbjct: 143 CFVST-AGSFKQWLQAPSDDKGQDGIHNFSITARIMHI 179
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 376 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 471
+GG + K+S S + G +P S L H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 376 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 471
+GG + K+S S + G +P S L H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 376 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 471
+GG + K+S S + G +P S L H+S P
Sbjct: 335 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 366
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 376 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 471
+GG + K+S S + G +P S L H+S P
Sbjct: 335 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 366
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 376 VGGRVRKISESRSEGPALSPRSAGLSPHRSAP 471
+GG + K+S S + G +P S L H+S P
Sbjct: 819 IGGSLAKLSASGASGSTGAPPSPALGYHQSLP 850
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,019,901
Number of Sequences: 27780
Number of extensions: 208925
Number of successful extensions: 774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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