Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0038
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    25   3.5  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    25   3.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.1  

>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 590 MECLIIFSLSCSK-KKTLRYCLDVLSLPY 673
           + C  +  LS  +  +T+ +CLDVL +P+
Sbjct: 140 LNCPKVVPLSDERLTETMHFCLDVLDIPF 168


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 590 MECLIIFSLSCSK-KKTLRYCLDVLSLPY 673
           + C  +  LS  +  +T+ +CLDVL +P+
Sbjct: 140 LNCPKVVPLSDERLTETMHFCLDVLDIPF 168


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 605 IFSLSCSKKKTLRYCLDVLSLPYYHYYYFNILHI 706
           +FS+S S  K +      L     H+Y+ N+L +
Sbjct: 217 VFSISTSNGKGVVRLARALDYERQHFYHINVLAV 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,911
Number of Sequences: 2352
Number of extensions: 14109
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)