Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0037
         (717 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2KUG3 Cluster: Putative O-antigen export ABC transport...    33   7.0  
UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase...    33   7.0  

>UniRef50_Q2KUG3 Cluster: Putative O-antigen export ABC
           transporter,putative permease protein precursor; n=1;
           Bordetella avium 197N|Rep: Putative O-antigen export ABC
           transporter,putative permease protein precursor -
           Bordetella avium (strain 197N)
          Length = 256

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 151 HTKNWYVFRNNKIRVW*FKLPTLKLRILRKFHKKRNYYILRFIFVVLW 8
           +T N +V RN++I VW F + TL   ++   H      ++ F F   W
Sbjct: 85  YTANGHVMRNHRIPVWFFAVRTLGYHLINLAHNLALVCVVLFFFGTRW 132


>UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase;
           n=5; Aphelenchus avenae|Rep: Putative trehalose
           6-phosphate synthase - Aphelenchus avenae (Mycophagous
           nematode worm)
          Length = 1303

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -1

Query: 498 GFFLHITIVFFLNDNFFVFTRVCMFVIYRG 409
           GFFLHI   F   DNFF   R+C F I RG
Sbjct: 534 GFFLHIP--FLPPDNFFTKYRLCAFPIMRG 561


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,203,071
Number of Sequences: 1657284
Number of extensions: 11793667
Number of successful extensions: 25518
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25510
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)