Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0036
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine rece...    33   0.20 
Z68220-5|CAA92490.2|  282|Caenorhabditis elegans Hypothetical pr...    31   0.62 
Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical ...    28   5.8  

>U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine
           receptor, class x protein20 protein.
          Length = 286

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +3

Query: 327 FYLLGTYILTRSLFKL--ILCTTTYRLLQCFLF--NVIFLGAFYHLRYCQHVSFISYIVF 494
           F    TYI+    + +  ++CTT Y LL+C+L+    +++ ++    +C H+++    +F
Sbjct: 115 FSNFNTYIMICMAYAIAIVMCTTFYELLECYLYFHADLWIFSYPETEHCNHLTWYCDFIF 174


>Z68220-5|CAA92490.2|  282|Caenorhabditis elegans Hypothetical
           protein T20D3.8 protein.
          Length = 282

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 412 SSLMLYFLALFTIYVIANMCHLLVILFSLAFMHILFRLRLAII 540
           SS +  FL+LF+IY I++    L I F+L  + ILF   L +I
Sbjct: 217 SSTIFCFLSLFSIYCISDFSLELSICFALLHIFILFICPLILI 259


>Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical
           protein C08F11.9 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 382 VPQLTGC-YNASSLMLYFLALFTIYVIANMCHLLVILFSL 498
           +P L G  Y   SL+    + F +Y+I  + HLL+ L +L
Sbjct: 86  MPMLEGSNYATGSLIFLIGSYFALYIIVQVFHLLIFLLAL 125


>Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical
           protein C08B11.8 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = +3

Query: 276 FQLSSTFKCLCDILIFPFYLLGTYILTRSLFKLILCTTTYRLLQCFL--FNVIFLGAFYH 449
           F++S T   L    +F F++    IL  ++  L+L +    L+  FL   N+        
Sbjct: 360 FRISLTATGL-SFFLFSFHVHEKTILLAAVPALLLISEYTSLVIWFLNITNISIFSLCVK 418

Query: 450 LRYCQHVSFISYIVFTRIYAYTI*IKISYNLILLINFFV 566
             +   +SF  +  F   YAYT   KIS+ L +LI F +
Sbjct: 419 DNFALSLSFF-FAYFVVSYAYTAPRKISHILTILIGFAI 456


>AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical
           protein T22B11.2 protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 357 RSLFKLILCTTTYRLLQCFLFNVIFLGAF--YHLRYCQHVSFI 479
           R+L  + LC   YRL    +F ++F GA+  Y ++Y   +  I
Sbjct: 20  RNLRSMRLCADEYRLSLIIVFIILFFGAYFLYQVQYKTGIDLI 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,716,234
Number of Sequences: 27780
Number of extensions: 284367
Number of successful extensions: 656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)