Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0030
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 33 0.12
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 1.4
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 29 1.9
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 29 1.9
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 2.5
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 2.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 28 4.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 28 4.4
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 4.4
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 27 5.8
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 27 5.8
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 27 5.8
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 27 7.6
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 27 7.6
U58742-2|AAB36858.1| 239|Caenorhabditis elegans Helix loop heli... 27 7.6
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 27 7.6
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +2
Query: 53 AAVPFAKPSVIAPVGLAGWAGHLSAPWGSHIATPLVAAAPVLGAHNYRGPLSLPPWQPAN 232
AA FA P APV A A L+AP +A P+ AP++ A R L+ P + PA
Sbjct: 86 AAPAFAAP---APVFAAPPAPVLAAP-APFLAPPVPPVAPIVSAFAPRPVLAAPAFAPAP 141
Query: 233 ILA 241
ILA
Sbjct: 142 ILA 144
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.5 bits (63), Expect = 1.4
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -2
Query: 273 TLRVSSGLPSAAKILAGCHGGNERGPL*LCAPS---TGAAATKGVAIWEPHGADKCPAQP 103
T+ G PS A + GG RG + A TGA+ V P GA A
Sbjct: 96 TMTALGGAPSGASTMTAV-GGAPRGASTMTAVGGAPTGASTMTAVG-GAPRGASTMTAVG 153
Query: 102 ARPTGAMTLGFANGTAAKEHNTSSLI 25
PTGA T+ A G A E +T + +
Sbjct: 154 GAPTGASTM-TAVGGAPGEASTMTAV 178
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 487 CSVSQTSMTNRTGQPKWSNRCMGDQTCGRPVDSGYVRPRRCRSQN 353
C + Q +T+ T Q N+C +Q + +RP R S N
Sbjct: 96 CQLQQNELTDNTHQSSQVNQCDYNQNMSEQSEQPILRPSRMESTN 140
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 43 VLLCCSTICEAQRHCSGGSSRLGWTLIRAMGLP----YRNTFSC 162
+L CC+ + C GG+ W I+ G+P Y + F C
Sbjct: 134 LLSCCTGMFSCGEGCEGGNPFKAWQYIQKHGIPTGGSYESQFGC 177
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 489 CAACPKPQ*PTGPASPSGAIGAWATKRAAGQSTR 388
C CP Q P GP P+GA G + A GQ R
Sbjct: 190 CFTCP--QGPLGPQGPNGAPGLRGMRGARGQPGR 221
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 489 CAACPKPQ*PTGPASPSGAIGAWATKRAAGQSTR 388
C CP Q P GP P+GA G + A GQ R
Sbjct: 190 CFTCP--QGPLGPQGPNGAPGLRGMRGARGQPGR 221
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -2
Query: 456 GPASPSGAIGAWATKRAAGQSTRAT*DHAAAGARTAERFFKRCTP 322
GPA P GA G T AAG +A D A+ A +A F C P
Sbjct: 128 GPAGPPGADGNPGTDGAAGNPGQAGAD-ASQDAPSASDFCFDCPP 171
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +2
Query: 53 AAVPFAKPSVIAPVGLAGWAGHLSAPWGSHIATPLVAAAPVLGAHNYRG------PLSLP 214
AA P P+ +A A + +A+P++AAAP L A + G P P
Sbjct: 87 AAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASINGLPVAAAPAFAP 146
Query: 215 PWQPANILAA 244
+ PA + AA
Sbjct: 147 AFAPAAVPAA 156
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 477 PKPQ*PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAA 364
P P P+GPA P+G GA T G + +T AA
Sbjct: 186 PGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAA 223
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 486 AACPKPQ*PTGPASPSGAIGAWATKRAAGQ 397
A P PQ P GPA GA G + A GQ
Sbjct: 141 AGAPGPQGPDGPAGAPGADGQAGSPGAPGQ 170
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = -3
Query: 488 VQRVPNLNDQQDRPAQVEQ*VHGRPNVRQASRLGLRETTPLQEPEQQNVSSKDAH 324
+Q+ P + + RP+ ++ + P R + R+ TP+ EP + V D +
Sbjct: 478 IQQRPGASSRAPRPSMAQEDLLRSPTRRLSERVPQEHQTPVLEPRRFQVKVTDTY 532
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
C CP+ P P GP PSG G+ + GQ
Sbjct: 145 CQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQ 176
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -2
Query: 489 CAACPK-PQ*PTGPASPSGAIG 427
C CP+ P P GPA P G +G
Sbjct: 304 CVPCPQGPLGPAGPAGPQGNLG 325
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 477 PKPQ*PTGPASPSGAIGAWATKRAAGQSTRA 385
P P+ P GPA P+G GA A G + A
Sbjct: 146 PGPEGPAGPAGPAGNAGADGEAGAEGPAGEA 176
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
C CP+ P P GP PSG G + GQ
Sbjct: 112 CQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQ 143
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
C CP+ P P GP PSG G + GQ
Sbjct: 145 CQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQ 176
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 486 AACPKPQ*PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAAGA 358
A P P GPA P+G+ GA + G S D+ AAGA
Sbjct: 225 AGAPGAPGPDGPAGPAGSPGAPGNPGSQG-SQGPVGDNGAAGA 266
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 27.1 bits (57), Expect = 7.6
Identities = 33/135 (24%), Positives = 43/135 (31%), Gaps = 1/135 (0%)
Frame = -2
Query: 462 PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAAGARTAERFFKRCTPPCSRAFPVK*TAR 283
P G A + +IGA G ST A +GA T S V
Sbjct: 73 PVGGAPAAVSIGAPPPAGGGGASTMTALGGAPSGASTMTA-VGGAPRGASTMTAVGGVPS 131
Query: 282 SWFTLRVSSGLPSAAKILAGCHGG-NERGPL*LCAPSTGAAATKGVAIWEPHGADKCPAQ 106
T+ G P+ A + G P+ + A+T P GA A
Sbjct: 132 GASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVGGAPTGASTMTAV 191
Query: 105 PARPTGAMTLGFANG 61
PTGA T+ G
Sbjct: 192 GGAPTGASTMTAVGG 206
>U58742-2|AAB36858.1| 239|Caenorhabditis elegans Helix loop helix
protein 29 protein.
Length = 239
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = -3
Query: 203 EVLYNYVRQVLEQQQLKVLRYGSPMARISVQPSRLDPPEQ 84
+++ Y+ Q+ EQ + + + SPM ++ ++P++ PEQ
Sbjct: 142 QIILEYICQMPEQSEA-IEKENSPMYQVYLEPTKCISPEQ 180
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 489 CAACPKPQ*PTGPASPSGAIG 427
C CP Q P GPA PSG G
Sbjct: 144 CVKCP--QGPAGPAGPSGPAG 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,563
Number of Sequences: 27780
Number of extensions: 293576
Number of successful extensions: 1256
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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