Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0029
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.69 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.69 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 184 LFQFKNTTSLYFWIIKPYQ*QGYVLKKNYCYLFISILKPTELKKVI*IVYTSRTIGTCF 360
           LF+    T++  W        GYV+  +  YLFI I    E    + ++YT      CF
Sbjct: 277 LFEITTITAMVMWF-------GYVI--DTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCF 326


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 184 LFQFKNTTSLYFWIIKPYQ*QGYVLKKNYCYLFISILKPTELKKVI*IVYTSRTIGTCF 360
           LF+    T++  W        GYV+  +  YLFI I    E    + ++YT      CF
Sbjct: 233 LFEITTITAMVMWF-------GYVI--DTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCF 282


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 412 NLFKP*CI*NKYFVKCFES 356
           NL +  C   KYFV C ES
Sbjct: 83  NLCRSECFSTKYFVGCVES 101


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +1

Query: 100 IIYTFCL*SFFFNYVFFCEFSIFS-----CCV*LF 189
           II+T  L      Y FFC F IF+     CC  +F
Sbjct: 154 IIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 103 IYTFCL*SFFFNYVFFCEFSIF 168
           IY FC     F   F+C FS++
Sbjct: 298 IYYFCRAFIIFPTHFYCAFSLY 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,173
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)