Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0024
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    24   1.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = +2

Query: 89  KFDYVDELIQMLKDPLNYGLFLDDYS-ANILLNELLVKKNYTQAADIAALIMLQEEYNND 265
           KF  V++ I+ +   LN G + +  S   I+ NE+LV  N  Q      L+M        
Sbjct: 194 KFCVVNQYIKQVCK-LNNGHYKNFLSQVEIIHNEILVTHNEIQTIFSVPLLMKIASQFVG 252

Query: 266 ILCSL--CQYSSYMFIKNYVEPE 328
           I CSL  C +  Y++    V P+
Sbjct: 253 IFCSLYFCIF-GYIYDDEMVVPQ 274


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = +2

Query: 89  KFDYVDELIQMLKDPLNYGLFLDDYS-ANILLNELLVKKNYTQAADIAALIMLQEEYNND 265
           KF  V++ I+ +   LN G + +  S   I+ NE+LV  N  Q      L+M        
Sbjct: 19  KFCVVNQYIKQVCK-LNNGHYKNFLSQVEIIHNEILVTHNEIQTIFSVPLLMKIASQFVG 77

Query: 266 ILCSL--CQYSSYMFIKNYVEPE 328
           I CSL  C +  Y++    V P+
Sbjct: 78  IFCSLYFCIF-GYIYDDEMVVPQ 99


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 254 YNNDILCSLCQYSSYMFIKNYVEPEPAV 337
           YN D+ C+  Q   Y+ + N   P P +
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPESPYPQI 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,756
Number of Sequences: 336
Number of extensions: 2418
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)