Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0024
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical p... 89 2e-18
Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.2
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.2
AF024503-16|AAG24086.2| 287|Caenorhabditis elegans Serpentine r... 30 1.6
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 29 2.1
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 29 2.1
AF022972-3|AAC48235.2| 526|Caenorhabditis elegans Udp-glucurono... 28 6.3
>Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 89.4 bits (212), Expect = 2e-18
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Frame = +2
Query: 5 DLLHKLRLSAETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLN 184
+LL+KLR S + LES+ +A VR +K+ + +I + DP+NYG+FL+ + A I+++
Sbjct: 90 ELLYKLRHSVKAAEKLESSEYAIVRLLLKYQ-PETIITLANDPINYGVFLNQHLACIVID 148
Query: 185 ELLVKKNYTQAADIAALIMLQEEYNNDILCSLCQYSSYMFIKNYVEPEPAVM------XX 346
L N AA I ++ QEE +N++L L Y +++ VE + +
Sbjct: 149 HFLKTSNIQAAARIVTWMIQQEELDNELLNILGLYVCAKWVELPVEQQTLDLGGADDEEE 208
Query: 347 XXXXXXXXXXRVKFLRNPYFDDHFDIKDRLKLAGKTLAWISEKT---SNTLNNNLQLIGW 517
+ +L+N FD+HFD+ + L GK+L W+S T + L ++L +G
Sbjct: 209 DINDDDIRTFKFPYLKNDSFDEHFDLSNPHHLIGKSLQWLSRDTKFIDSQLKSSLNALGA 268
Query: 518 LIYKKYDQLLAT 553
++++K + +T
Sbjct: 269 VLFEKLAEANST 280
>Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 89.4 bits (212), Expect = 2e-18
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Frame = +2
Query: 5 DLLHKLRLSAETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLN 184
+LL+KLR S + LES+ +A VR +K+ + +I + DP+NYG+FL+ + A I+++
Sbjct: 90 ELLYKLRHSVKAAEKLESSEYAIVRLLLKYQ-PETIITLANDPINYGVFLNQHLACIVID 148
Query: 185 ELLVKKNYTQAADIAALIMLQEEYNNDILCSLCQYSSYMFIKNYVEPEPAVM------XX 346
L N AA I ++ QEE +N++L L Y +++ VE + +
Sbjct: 149 HFLKTSNIQAAARIVTWMIQQEELDNELLNILGLYVCAKWVELPVEQQTLDLGGADDEEE 208
Query: 347 XXXXXXXXXXRVKFLRNPYFDDHFDIKDRLKLAGKTLAWISEKT---SNTLNNNLQLIGW 517
+ +L+N FD+HFD+ + L GK+L W+S T + L ++L +G
Sbjct: 209 DINDDDIRTFKFPYLKNDSFDEHFDLSNPHHLIGKSLQWLSRDTKFIDSQLKSSLNALGA 268
Query: 518 LIYKKYDQLLAT 553
++++K + +T
Sbjct: 269 VLFEKLAEANST 280
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 17 KLRLSAETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNEL 190
K R ++ ES S V S+ +YVDELIQ L L Y + DD + + N++
Sbjct: 291 KGRWRSDVNKYFESLSRKNV-DSVSREYVDELIQSLSIQLKYLTYHDDCKCDDIWNQM 347
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 392 RNPYFDDHFDIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEEL 565
RN Y DD + +R+K+ + L + K S T + +Q + L+ +K +QL +E+
Sbjct: 85 RNEYLDDLEEANERIKILDEELDKLEAKISKTEESLVQSVSMLL-EKDEQLKTIRKEM 141
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 392 RNPYFDDHFDIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEEL 565
RN Y DD + +R+K+ + L + K S T + +Q + L+ +K +QL +E+
Sbjct: 85 RNEYLDDLEEANERIKILDEKLDKLEAKISKTEESLVQSVSMLL-EKDEQLKTIRKEM 141
>AF024503-16|AAG24086.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein23 protein.
Length = 287
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 177 NMFAL*SSKNSP*FKGSFNICINSST*SNLILCL---TVACDVDSSMLPV 37
N+F L +++N GSF I + NL +CL V C + S +P+
Sbjct: 22 NLFVLAAARNMSSMNGSFGIITKNHAICNLTMCLLYVLVVCPMQLSNIPI 71
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 419 DIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYK 529
D+ L KT W+ NT NN +QLIG +I K
Sbjct: 174 DVNSIWSLKTKTATWLGSNC-NTPNNRIQLIGKMIQK 209
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 419 DIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYK 529
D+ L KT W+ NT NN +QLIG +I K
Sbjct: 174 DVNSIWSLKTKTATWLGSNC-NTPNNRIQLIGKMIQK 209
>AF022972-3|AAC48235.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein40 protein.
Length = 526
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 464 ISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEELC 568
I+ + +N L NNL L+ L KK+D +L S C
Sbjct: 116 ITREQNNVLANNLALLDGLKQKKFDLILFESVFTC 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,730,460
Number of Sequences: 27780
Number of extensions: 213460
Number of successful extensions: 532
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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