Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0024
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    24   1.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.8  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   9.8  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 325 RASCHGRKQQKSGRNQNKSKVFTES 399
           R SC   ++QKS +N+N  + + E+
Sbjct: 271 RYSCSREREQKSYKNENSYRKYRET 295


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 90 LILCLTVACDVDSSMLPVSAESLNL 16
          LI+CL++AC   +S +     S NL
Sbjct: 7  LIVCLSIACQDVTSAIHQRKSSKNL 31


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 522 YIRNMISYWQQVKNY 566
           Y+R M+ YW     Y
Sbjct: 236 YMREMLPYWMSSSQY 250


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 522 YIRNMISYWQQVKNY 566
           Y+R M+ YW     Y
Sbjct: 236 YMREMLPYWMSSSQY 250


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 524 YKKYDQLLATSEELCTNT 577
           YKK  Q+L    +LC  T
Sbjct: 259 YKKIQQILIRMNKLCIQT 276


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,156
Number of Sequences: 438
Number of extensions: 2957
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)