Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0023
         (300 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   6.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    19   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   8.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 295 DASRLEFFKENTSSVNLSHEFY*RTRGSMCATFFCKYSKK 176
           D++R  FFK  TS +    E   +T GS+  T + ++++K
Sbjct: 202 DSARKPFFKLLTSKIYKVLEEKYKTSGSL-YTCWSEFTQK 240



 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 162 STEKPFFEYLQKNVAHIL 215
           S  KPFF+ L   +  +L
Sbjct: 203 SARKPFFKLLTSKIYKVL 220


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 206 THTSSRALIEFMAEVDGRCIFFEKFQ 283
           +H   +   E  A+ D   I+FEK++
Sbjct: 89  SHNKQQMWKELTAKYDPDGIYFEKYK 114


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -2

Query: 146 LIKSDCCNLSAVNSNGY*RCSIYSSISAQLQQFLCCQWILVYL 18
           L+  DCC  +    NG    +I       ++ FLC   +L  +
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTVI 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,332
Number of Sequences: 336
Number of extensions: 1063
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)