Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0023
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   0.62 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   3.3  
AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    22   4.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   7.6  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 71  ISAQLQQFLCCQWILV 24
           +S+Q+QQFLC Q +L+
Sbjct: 537 VSSQMQQFLCLQNVLL 552


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 49   NCWSCALMLL*MEHXXXXXXXTADRLQQSLLISYRYRVQLKNLSSNICRRT 201
            NC  C   +  +EH       + DR++  +      RV + N+ S +C R+
Sbjct: 937  NCPECGDAVEDVEHVLFHCPRS-DRIRNEMQQRCHSRVTMDNIVSEMCARS 986


>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 138 FNKLQVSSSTEKPFFEYLQKNVAH 209
           FNK+Q+   T  P  + L   +AH
Sbjct: 67  FNKMQLFDDTNGPIVDNLVVQLAH 90


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 148 YRYRVQLKNLSSNICR 195
           +RYR  L  +  N+CR
Sbjct: 450 FRYRRYLSKIQRNLCR 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,126
Number of Sequences: 2352
Number of extensions: 4905
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)